Difference between revisions of "P122-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] ==
−
* taxonomic range:
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
+
 
* common name:
 
* common name:
−
** pyrimidine ribonucleosides salvage II
+
** heterolactic fermentation
 +
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
 
* Synonym(s):
 
* Synonym(s):
 +
** lactate heterofermentation
 +
** glucose fermentation to lactate
 +
** phosphoketolase pathway
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''1''' reaction(s) found
+
'''15''' reactions found over '''18''' reactions in the full pathway
−
** [[CYTIDEAM2-RXN]]
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* [[2PGADEHYDRAT-RXN]]
 +
** 5 associated gene(s):
 +
*** [[CHC_T00008696001]]
 +
*** [[CHC_T00008696001_1]]
 +
*** [[CHC_T00009127001_1]]
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*** [[CHC_T00008490001]]
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*** [[CHC_T00009127001]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[6PGLUCONDEHYDROG-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00008523001_1]]
 +
*** [[CHC_T00008023001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[6PGLUCONOLACT-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00000675001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[ACETALD-DEHYDROG-RXN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[ALCOHOL-DEHYDROG-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00010066001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[DLACTDEHYDROGNAD-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00003974001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[FRUCTOKINASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00008037001_1]]
 +
*** [[CHC_T00007969001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
* [[GAPOXNPHOSPHN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00009438001_1]]
 +
*** [[CHC_T00009523001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[GLU6PDEHYDROG-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00010152001]]
 +
*** [[CHC_T00010152001_1]]
 +
*** [[CHC_T00005901001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[GLUCOKIN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00001373001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PEPDEPHOS-RXN]]
 +
** 6 associated gene(s):
 +
*** [[CHC_T00008530001]]
 +
*** [[CHC_T00008652001]]
 +
*** [[CHC_T00008652001_1]]
 +
*** [[CHC_T00008482001_1]]
 +
*** [[CHC_T00008482001]]
 +
*** [[CHC_T00008530001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PGLUCISOM-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009370001]]
 +
*** [[CHC_T00009370001_1]]
 +
*** [[CHC_T00008268001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[PHOSGLYPHOS-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00004105001_1]]
 +
*** [[CHC_T00009179001]]
 +
*** [[CHC_T00009179001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RIBULP3EPIM-RXN]]
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** 3 associated gene(s):
 +
*** [[CHC_T00008270001_1]]
 +
*** [[CHC_T00006121001_1]]
 +
*** [[CHC_T00008270001]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-15513]]
 +
** 5 associated gene(s):
 +
*** [[CHC_T00007707001_1]]
 +
*** [[CHC_T00000449001_1]]
 +
*** [[CHC_T00001519001_1]]
 +
*** [[CHC_T00001241001_1]]
 +
*** [[CHC_T00004201001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''1''' reaction(s) not found
+
* [http://metacyc.org/META/NEW-IMAGE?object=L-LACTATE-DEHYDROGENASE-RXN L-LACTATE-DEHYDROGENASE-RXN]
−
** [http://metacyc.org/META/NEW-IMAGE?object=URIDINE-NUCLEOSIDASE-RXN URIDINE-NUCLEOSIDASE-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSACETYLTRANS-RXN PHOSACETYLTRANS-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOKETOLASE-RXN PHOSPHOKETOLASE-RXN]
 
== External links  ==
 
== External links  ==
−
* ECOCYC:
+
{{#set: common name=heterolactic fermentation}}
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6556 PWY-6556]
+
{{#set: taxonomic range=TAX-1239}}
−
{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=lactate heterofermentation|glucose fermentation to lactate|phosphoketolase pathway}}
−
{{#set: taxonomic range=TAX-4751}}
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{{#set: reaction found=15}}
−
{{#set: taxonomic range=TAX-2}}
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{{#set: total reaction=18}}
−
{{#set: taxonomic range=TAX-33090}}
+
{{#set: completion rate=83.0}}
−
{{#set: common name=pyrimidine ribonucleosides salvage II}}
+
−
{{#set: reaction found=1}}
+
−
{{#set: reaction not found=1}}
+

Latest revision as of 16:36, 9 January 2019

Pathway P122-PWY

  • common name:
    • heterolactic fermentation
  • taxonomic range:
  • Synonym(s):
    • lactate heterofermentation
    • glucose fermentation to lactate
    • phosphoketolase pathway

Reaction(s) found

15 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=P122-PWY&oldid=21979"