Difference between revisions of "CDP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosphatidylethanolam...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.17-RXN 2.1.1.17-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CDP CDP] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O
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* molecular weight:
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** 400.155   
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* inchi key:
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** InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K
 
* common name:
 
* common name:
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** Phosphatidylethanolamine N-methyltransferase
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** CDP
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.17 EC-2.1.1.17]
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* Synonym(s):
 
* Synonym(s):
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** cytidine-diphosphate
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** cytidine-5'-diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[CDPREDUCT-RXN]]
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** 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-405]][c] '''+''' 1 [[PROTON]][c]
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* [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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* With common name(s):
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* [[RXN-12198]]
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** 1 an L-1-phosphatidylethanolamine[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a phosphatidyl-N-methylethanolamine[c] '''+''' 1 H+[c]
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* [[CDPKIN-RXN]]
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== Reaction(s) known to produce the compound ==
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== Genes associated with this reaction  ==
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* [[RXN-7683]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-12195]]
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* [[CHC_T00009414001_1]]
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* [[RXN-11832]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Reaction(s) of unknown directionality ==
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* [[CHC_T00009046001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008258001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009414001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00002431001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-6825]], phosphatidylcholine biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6825 PWY-6825]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* METABOLIGHTS : MTBLC58069
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11164 11164]
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* BIGG : cdp
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* LIGAND-RXN:
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* CAS : 63-38-7
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** [http://www.genome.jp/dbget-bin/www_bget?R02056 R02056]
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* HMDB : HMDB01546
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* UNIPROT:
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P05374 P05374]
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** [http://www.chemspider.com/Chemical-Structure.16740259.html 16740259]
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** [http://www.uniprot.org/uniprot/Q05197 Q05197]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q08388 Q08388]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58069 58069]
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=Phosphatidylethanolamine N-methyltransferase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00112 C00112]
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{{#set: ec number=EC-2.1.1.17}}
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* PUBCHEM:
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{{#set: gene associated=CHC_T00009414001_1|CHC_T00009046001|CHC_T00008258001|CHC_T00009414001|CHC_T00002431001_1}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=20056867 20056867]
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{{#set: in pathway=PWY-6825}}
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{{#set: smiles=C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O}}
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{{#set: reconstruction category=orthology}}
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{{#set: molecular weight=400.155    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: inchi key=InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: common name=CDP}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=cytidine-diphosphate|cytidine-5'-diphosphate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: consumed by=CDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN-12198|CDPKIN-RXN}}
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{{#set: reconstruction source=original_genome}}
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{{#set: produced by=RXN-7683|RXN-12195|RXN-11832}}

Latest revision as of 17:49, 9 January 2019

Metabolite CDP

  • smiles:
    • C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O
  • molecular weight:
    • 400.155
  • inchi key:
    • InChIKey=ZWIADYZPOWUWEW-XVFCMESISA-K
  • common name:
    • CDP
  • Synonym(s):
    • cytidine-diphosphate
    • cytidine-5'-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • METABOLIGHTS : MTBLC58069
  • BIGG : cdp
  • CAS : 63-38-7
  • HMDB : HMDB01546
  • CHEMSPIDER:
  • CHEBI:
  • LIGAND-CPD:
  • PUBCHEM:
"C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))OP(OP([O-])([O-])=O)([O-])=O" cannot be used as a page name in this wiki.




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