Difference between revisions of "PWY-6317"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enz...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCMP-DEAMINASE-RXN DCMP-DEAMINASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** D-galactose degradation I (Leloir pathway)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/3.5.4.12 EC-3.5.4.12]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
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** Leloir pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''5''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[DCMP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[DUMP]][c] '''+''' 1 [[AMMONIUM]][c]
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* [[ALDOSE1EPIM-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 H2O[c] '''+''' 1 dCMP[c] '''+''' 1 H+[c] '''=>''' 1 dUMP[c] '''+''' 1 ammonium[c]
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*** [[CHC_T00007315001_1]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-galdieria.sulphuraria]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[GALACTOKIN-RXN]]
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* [[CHC_T00004709001_1]]
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** 3 associated gene(s):
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00007304001_1]]
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** [[pantograph]]-[[a.taliana]]
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*** [[CHC_T00006831001_1]]
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== Pathways  ==
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*** [[CHC_T00006828001_1]]
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* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
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** 3 reconstruction source(s) associated:
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** '''8''' reactions found over '''8''' reactions in the full pathway
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*** [[orthology-galdieria.sulphuraria]]
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== Reconstruction information  ==
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*** [[orthology-arabidopsis_thaliana]]
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* [[orthology]]:
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*** [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]:
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* [[GALACTURIDYLYLTRANS-RXN]]
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*** [[galdieria.sulphuraria]]
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** 1 associated gene(s):
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*** [[a.taliana]]
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*** [[CHC_T00010193001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** 4 associated gene(s):
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*** [[CHC_T00008779001_1]]
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*** [[CHC_T00008779001]]
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*** [[CHC_T00003000001_1]]
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*** [[CHC_T00005896001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[UDPGLUCEPIM-RXN]]
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** 5 associated gene(s):
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*** [[CHC_T00007304001_1]]
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*** [[CHC_T00006828001_1]]
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*** [[CHC_T00009498001]]
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*** [[CHC_T00009498001_1]]
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*** [[CHC_T00006831001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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* ARACYC:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22924 22924]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=GALACTMETAB-PWY GALACTMETAB-PWY]
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* LIGAND-RXN:
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{{#set: common name=D-galactose degradation I (Leloir pathway)}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01663 R01663]
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{{#set: taxonomic range=TAX-4751}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.uniprot.org/uniprot/P32321 P32321]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P00814 P00814]
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{{#set: common name=Leloir pathway}}
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** [http://www.uniprot.org/uniprot/P16006 P16006]
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{{#set: reaction found=5}}
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** [http://www.uniprot.org/uniprot/P06773 P06773]
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{{#set: total reaction=5}}
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** [http://www.uniprot.org/uniprot/O74069 O74069]
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{{#set: completion rate=100.0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.5.4.12}}
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{{#set: gene associated=CHC_T00004709001_1}}
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{{#set: in pathway=PWY-7210}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Latest revision as of 17:40, 9 January 2019

Pathway PWY-6317

  • common name:
    • D-galactose degradation I (Leloir pathway)
  • taxonomic range:
  • Synonym(s):
    • Leloir pathway

Reaction(s) found

5 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6317&oldid=22102"