Difference between revisions of "PROLINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Gene == Gene CHC_1145 == * left end position: ** 175326 * transcription direction: ** NEGATIVE * right end position: ** 175676 * common name: ** ftrB * centisome...")
 
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_1145 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 175326
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** LEFT-TO-RIGHT
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 175676
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* common name:
 
* common name:
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** ftrB
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** proline--tRNA ligase
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* centisome position:
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** prolyl-tRNA synthetase
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** 97.35682   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.15 EC-6.1.1.15]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-9944]]
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* With identifiers:
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** original_genome
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** 1 [[PRO-tRNAs]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-PRO-tRNAs]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 a tRNApro[c] '''+''' 1 L-proline[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-prolyl-[tRNApro][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008394001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008394001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009364001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009364001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 +
** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=175326}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14305 14305]
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{{#set: right end position=175676}}
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* UNIPROT:
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{{#set: common name=ftrB}}
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** [http://www.uniprot.org/uniprot/O51363 O51363]
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{{#set: centisome position=97.35682    }}
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** [http://www.uniprot.org/uniprot/O58734 O58734]
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{{#set: reaction associated=RXN-9944}}
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** [http://www.uniprot.org/uniprot/Q9ZMJ6 Q9ZMJ6]
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** [http://www.uniprot.org/uniprot/P43830 P43830]
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** [http://www.uniprot.org/uniprot/P47525 P47525]
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** [http://www.uniprot.org/uniprot/O26708 O26708]
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** [http://www.uniprot.org/uniprot/Q9JU09 Q9JU09]
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** [http://www.uniprot.org/uniprot/Q58635 Q58635]
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** [http://www.uniprot.org/uniprot/P56124 P56124]
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** [http://www.uniprot.org/uniprot/O83195 O83195]
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** [http://www.uniprot.org/uniprot/Q9Z851 Q9Z851]
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** [http://www.uniprot.org/uniprot/O31755 O31755]
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** [http://www.uniprot.org/uniprot/P36431 P36431]
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** [http://www.uniprot.org/uniprot/Q9ZDE7 Q9ZDE7]
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** [http://www.uniprot.org/uniprot/Q9PHX1 Q9PHX1]
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** [http://www.uniprot.org/uniprot/Q9CDT4 Q9CDT4]
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** [http://www.uniprot.org/uniprot/Q9WYY4 Q9WYY4]
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** [http://www.uniprot.org/uniprot/P75382 P75382]
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** [http://www.uniprot.org/uniprot/Q49090 Q49090]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
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** [http://www.uniprot.org/uniprot/P16659 P16659]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03661 R03661]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=proline--tRNA ligase}}
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{{#set: common name=prolyl-tRNA synthetase}}
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{{#set: ec number=EC-6.1.1.15}}
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{{#set: gene associated=CHC_T00008394001|CHC_T00008394001_1|CHC_T00009364001_1|CHC_T00009364001}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:47, 9 January 2019

Reaction PROLINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • proline--tRNA ligase
    • prolyl-tRNA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNApro[c] + 1 L-proline[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-prolyl-[tRNApro][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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