|
|
| (2 intermediate revisions by the same user not shown) |
| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Amino-Acids-20 Amino-Acids-20] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** diaminopimelate decarboxylase | + | ** a proteinogenic amino acid |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/4.1.1.20 EC-4.1.1.20]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** a protein-building amino acid |
| | + | ** a standard α amino acid |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers: | + | * [[RXN66-336]] |
| − | ** 1 [[PROTON]][c] '''+''' 1 [[MESO-DIAMINOPIMELATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c]
| + | * [[RXN-6601]] |
| − | * With common name(s):
| + | == Reaction(s) known to produce the compound == |
| − | ** 1 H+[c] '''+''' 1 meso-diaminopimelate[c] '''=>''' 1 CO2[c] '''+''' 1 L-lysine[c]
| + | * [[3.4.13.9-RXN]] |
| − | | + | * [[3.4.11.1-RXN]] |
| − | == Genes associated with this reaction == | + | * [[3.4.11.4-RXN]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | * [[3.4.11.14-RXN]] |
| − | * [[CHC_T00009352001_1]] | + | == Reaction(s) of unknown directionality == |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | * [[ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN]] |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00009352001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00004243001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097] | + | |
| − | ** '''7''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
| + | |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
| + | |
| − | ** '''6''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | *** [[a.taliana]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a proteinogenic amino acid}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15101 15101]
| + | {{#set: common name=a protein-building amino acid|a standard α amino acid}} |
| − | * LIGAND-RXN:
| + | {{#set: consumed by=RXN66-336|RXN-6601}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00451 R00451]
| + | {{#set: produced by=3.4.13.9-RXN|3.4.11.1-RXN|3.4.11.4-RXN|3.4.11.14-RXN}} |
| − | * UNIPROT:
| + | {{#set: reversible reaction associated=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P19572 P19572]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A5M4 P0A5M4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P44316 P44316]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56129 P56129]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67262 O67262]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JWA6 Q9JWA6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CG26 Q9CG26]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00861 P00861]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O27390 O27390]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PII5 Q9PII5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q58497 Q58497]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O29458 O29458]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41023 P41023]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P23630 P23630]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P09890 P09890]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q55484 Q55484]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O05321 O05321]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=diaminopimelate decarboxylase}} | + | |
| − | {{#set: ec number=EC-4.1.1.20}} | + | |
| − | {{#set: gene associated=CHC_T00009352001_1|CHC_T00009352001|CHC_T00004243001_1}}
| + | |
| − | {{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}} | + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
| + | |
| − | {{#set: reconstruction category=annotation}} | + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
