Difference between revisions of "HOMOCYSMET-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-201 PWY66-201] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-201 PWY66-201] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** nicotine degradation IV
+
** 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.1.1.14 EC-2.1.1.14]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''1''' reaction(s) found
+
* With identifiers:
−
** [[RXN66-146]]
+
** 1 [[HOMO-CYS]][c] '''+''' 1 [[CPD-1302]][c] '''<=>''' 1 [[MET]][c] '''+''' 1 [[CPD-1301]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* '''16''' reaction(s) not found
+
** 1 L-homocysteine[c] '''+''' 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] '''<=>''' 1 L-methionine[c] '''+''' 1 tetrahydropteroyl tri-L-glutamate[c]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-105 RXN66-105]
+
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-104 RXN66-104]
+
== Genes associated with this reaction  ==
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-103 RXN66-103]
+
Genes have been associated with this reaction based on different elements listed below.
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-101 RXN66-101]
+
* Gene: [[CHC_T00009326001_1]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-142 RXN66-142]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-141 RXN66-141]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-62 RXN66-62]
+
** Source: [[orthology-arabidopsis_thaliana]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-61 RXN66-61]
+
* Gene: [[CHC_T00009326001]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-147 RXN66-147]
+
** Source: [[annotation-original_genome]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-13088 RXN-13088]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-145 RXN66-145]
+
* Gene: [[CHC_T00005524001_1]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-144 RXN66-144]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-13089 RXN-13089]
+
== Pathways  ==
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-81 RXN66-81]
+
* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-83 RXN66-83]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** [http://metacyc.org/META/NEW-IMAGE?object=RXN66-82 RXN66-82]
+
* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-40674}}
+
* RHEA:
−
{{#set: common name=nicotine degradation IV}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21196 21196]
−
{{#set: reaction found=1}}
+
* UNIPROT:
−
{{#set: reaction not found=16}}
+
** [http://www.uniprot.org/uniprot/P25665 P25665]
 +
** [http://www.uniprot.org/uniprot/P45331 P45331]
 +
** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
 +
** [http://www.uniprot.org/uniprot/O26869 O26869]
 +
** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
 +
** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
 +
** [http://www.uniprot.org/uniprot/P05694 P05694]
 +
** [http://www.uniprot.org/uniprot/Q42699 Q42699]
 +
** [http://www.uniprot.org/uniprot/Q39586 Q39586]
 +
** [http://www.uniprot.org/uniprot/O48613 O48613]
 +
** [http://www.uniprot.org/uniprot/P93263 P93263]
 +
** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase}}
 +
{{#set: ec number=EC-2.1.1.14}}
 +
{{#set: gene associated=CHC_T00009326001_1|CHC_T00009326001|CHC_T00005524001_1}}
 +
{{#set: in pathway=PWY-5041|PWY-702|PWY-6151|HSERMETANA-PWY|HOMOSER-METSYN-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:48, 9 January 2019

Reaction HOMOCYSMET-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-homocysteine[c] + 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] <=> 1 L-methionine[c] + 1 tetrahydropteroyl tri-L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5041, S-adenosyl-L-methionine cycle II: PWY-5041
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-702, L-methionine biosynthesis II: PWY-702
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-6151, S-adenosyl-L-methionine cycle I: PWY-6151
    • 3 reactions found over 6 reactions in the full pathway
  • HSERMETANA-PWY, L-methionine biosynthesis III: HSERMETANA-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I: HOMOSER-METSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=HOMOCYSMET-RXN&oldid=22301"