Difference between revisions of "ARG-PRO-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NADPYROPHOSPHAT-RXN NADPYROPHOSPHAT-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] ==
−
* direction:
+
* common name:
−
** LEFT-TO-RIGHT
+
** L-arginine degradation VI (arginase 2 pathway)
−
* ec number:
+
* taxonomic range:
−
** [http://enzyme.expasy.org/EC/3.6.1.22 EC-3.6.1.22]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* Synonym(s):
 
* Synonym(s):
 +
** L-proline biosynthesis from arginine
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''4''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c]
+
* [[ORNITHINE-GLU-AMINOTRANSFERASE-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 H2O[c] '''+''' 1 NAD+[c] '''=>''' 2 H+[c] '''+''' 1 AMP[c] '''+''' 1 β-nicotinamide D-ribonucleotide[c]
+
*** [[CHC_T00002893001_1]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-galdieria.sulphuraria]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00000276001_1]]
+
* [[PYRROLINECARBREDUCT-RXN]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 1 associated gene(s):
−
== Pathways  ==
+
*** [[CHC_T00001376001_1]]
−
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
+
** 2 reconstruction source(s) associated:
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
*** [[orthology-galdieria.sulphuraria]]
−
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
+
*** [[orthology-ectocarpus_siliculosus]]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
* [[SPONTPRO-RXN]]
−
* [[PWY-7761]], NAD salvage pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761]
+
** 0 associated gene:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** 1 reconstruction source(s) associated:
−
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III: [http://metacyc.org/META/NEW-IMAGE?object=NAD-BIOSYNTHESIS-II NAD-BIOSYNTHESIS-II]
+
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
== Reaction(s) not found ==
−
== Reconstruction information  ==
+
* [http://metacyc.org/META/NEW-IMAGE?object=ARGINASE-RXN ARGINASE-RXN]
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=L-arginine degradation VI (arginase 2 pathway)}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11800 11800]
+
{{#set: taxonomic range=TAX-33090}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-1117}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00103 R00103]
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: common name=L-proline biosynthesis from arginine}}
−
{{#set: ec number=EC-3.6.1.22}}
+
{{#set: reaction found=3}}
−
{{#set: gene associated=CHC_T00000276001_1}}
+
{{#set: total reaction=4}}
−
{{#set: in pathway=PWY-5381|PYRIDNUCSAL-PWY|PWY-7761|NAD-BIOSYNTHESIS-II}}
+
{{#set: completion rate=75.0}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+

Latest revision as of 16:46, 9 January 2019

Pathway ARG-PRO-PWY

  • common name:
    • L-arginine degradation VI (arginase 2 pathway)
  • taxonomic range:
  • Synonym(s):
    • L-proline biosynthesis from arginine

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=ARG-PRO-PWY&oldid=22238"