Difference between revisions of "PWY-5661"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-methy...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KETOISOCAPROATE-RXN KETOISOCAPROATE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
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** GDP-glucose biosynthesis
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/1.2.4.4 EC-1.2.4.4]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''3''' reactions in the full pathway
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** 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c]
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* [[GLUCOKIN-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 4-methyl-2-oxopentanoate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a [apo BCAA dehydrogenase E2 protein] N6-S-[3-methylbutanoyl]dihydrolipoyl-L-lysine[c]
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*** [[CHC_T00001373001_1]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-galdieria.sulphuraria]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00008584001_1]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 4 associated gene(s):
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* [[CHC_T00006349001_1]]
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*** [[CHC_T00008779001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00008779001]]
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== Pathways  ==
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*** [[CHC_T00003000001_1]]
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== Reconstruction information  ==
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*** [[CHC_T00005896001_1]]
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* [[orthology]]:
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** 3 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.34-RXN 2.7.7.34-RXN]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: common name=GDP-glucose biosynthesis}}
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** [http://www.uniprot.org/uniprot/P21839 P21839]
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{{#set: taxonomic range=TAX-2759}}
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** [http://www.uniprot.org/uniprot/P21953 P21953]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/P37940 P37940]
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/P37941 P37941]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P11178 P11178]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/P12694 P12694]
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** [http://www.uniprot.org/uniprot/P09061 P09061]
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** [http://www.uniprot.org/uniprot/P09060 P09060]
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** [http://www.uniprot.org/uniprot/P11960 P11960]
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** [http://www.uniprot.org/uniprot/O84344 O84344]
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** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
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** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
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** [http://www.uniprot.org/uniprot/P35738 P35738]
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** [http://www.uniprot.org/uniprot/P50136 P50136]
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** [http://www.uniprot.org/uniprot/O48615 O48615]
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** [http://www.uniprot.org/uniprot/O03849 O03849]
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** [http://www.uniprot.org/uniprot/Q53592 Q53592]
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** [http://www.uniprot.org/uniprot/Q53593 Q53593]
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** [http://www.uniprot.org/uniprot/O82450 O82450]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
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{{#set: ec number=EC-1.2.4.4}}
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{{#set: gene associated=CHC_T00008584001_1|CHC_T00006349001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 17:47, 9 January 2019

Pathway PWY-5661

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5661&oldid=22276"