Difference between revisions of "RXN-5463"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GALACTOSE GALACTOSE] == * smiles: ** C(O)C1(OC(O)C(O)C(O)C(O)1) * inchi key: ** InChIKey=WQZGKK...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GALACTOSE GALACTOSE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] ==
* smiles:
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* direction:
** C(O)C1(OC(O)C(O)C(O)C(O)1)
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** LEFT-TO-RIGHT
* inchi key:
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* ec number:
** InChIKey=WQZGKKKJIJFFOK-FPRJBGLDSA-N
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** [http://enzyme.expasy.org/EC/2.4.1.257 EC-2.4.1.257]
* common name:
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** β-D-galactose
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* molecular weight:
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** 180.157   
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* Synonym(s):
 
* Synonym(s):
** β-D-galactopyranose
 
** cerebrose
 
** 6-(hydroxymethyl)tetrahydropyran-2,3,4,5-tetraol
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
* [[BETAGALACTOSID-RXN]]
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** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[CPD-5161]][c] '''=>''' 1 [[CPD-5162]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c]
== Reaction(s) of unknown directionality ==
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* With common name(s):
* [[ALDOSE1EPIM-RXN]]
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** 1 GDP-α-D-mannose[c] '''+''' 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 H+[c] '''+''' 1 GDP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00007099001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* CAS : 7296-64-2
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* RHEA:
* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29522 29522]
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=439353 439353]
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* LIGAND-RXN:
* HMDB : HMDB03449
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** [http://www.genome.jp/dbget-bin/www_bget?R06238 R06238]
* LIGAND-CPD:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://www.genome.jp/dbget-bin/www_bget?C00962 C00962]
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{{#set: ec number=EC-2.4.1.257}}
* CHEMSPIDER:
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{{#set: gene associated=CHC_T00007099001_1}}
** [http://www.chemspider.com/Chemical-Structure.388476.html 388476]
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
* CHEBI:
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{{#set: reconstruction category=orthology}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28034 28034]
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
* BIGG : gal
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{{#set: reconstruction tool=pantograph}}
* BIGG : gal-bD
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{{#set: smiles=C(O)C1(OC(O)C(O)C(O)C(O)1)}}
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{{#set: inchi key=InChIKey=WQZGKKKJIJFFOK-FPRJBGLDSA-N}}
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{{#set: common name=β-D-galactose}}
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{{#set: molecular weight=180.157    }}
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{{#set: common name=β-D-galactopyranose|cerebrose|6-(hydroxymethyl)tetrahydropyran-2,3,4,5-tetraol}}
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{{#set: produced by=BETAGALACTOSID-RXN}}
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{{#set: consumed or produced by=ALDOSE1EPIM-RXN}}
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Latest revision as of 16:13, 23 May 2018

Reaction RXN-5463

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] + 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 H+[c] + 1 GDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links