Difference between revisions of "PWY-7222"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroli...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7222 PWY-7222] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** dihydrolipoamide dehydrogenase
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** guanosine deoxyribonucleotides de novo biosynthesis II
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** 2-oxoglutarate dehydrogenase, E1 component
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* taxonomic range:
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://enzyme.expasy.org/EC/1.2.4.2 EC-1.2.4.2]
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* Synonym(s):
 
* Synonym(s):
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** Oxoglutarate decarboxylase
 
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** 2-oxoglutarate decarboxylation
 
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c]
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* [[DGDPKIN-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 2-oxoglutarate[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c]
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*** [[CHC_T00009233001]]
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*** [[CHC_T00009233001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00009258001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[CHC_T00009258001]]
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* [[CHC_T00010287001_1]]
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** 4 reconstruction source(s) associated:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00008441001]]
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*** [[annotation-original_genome]]
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** ORIGINAL_GENOME
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*** [[orthology-arabidopsis_thaliana]]
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***AUTOMATED-NAME-MATCH
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00008312001_1]]
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* [[GDPREDUCT-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 4 associated gene(s):
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* [[CHC_T00008441001_1]]
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*** [[CHC_T00008926001]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00008926001_1]]
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* [[CHC_T00008312001]]
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*** [[CHC_T00008864001_1]]
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** ORIGINAL_GENOME
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*** [[CHC_T00008864001]]
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***AUTOMATED-NAME-MATCH
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** 4 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
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*** [[annotation-original_genome]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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*** [[orthology-arabidopsis_thaliana]]
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* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
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*** [[orthology-ectocarpus_siliculosus]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[RXN0-748]]
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== Reconstruction information  ==
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** 4 associated gene(s):
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* [[orthology]]:
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*** [[CHC_T00008864001_1]]
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** [[pantograph]]:
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*** [[CHC_T00008926001_1]]
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00008864001]]
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* [[annotation]]:
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*** [[CHC_T00008926001]]
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** [[pathwaytools]]:
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** 3 reconstruction source(s) associated:
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*** [[original_genome]]
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-746 RXN0-746]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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* ECOCYC:
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** [http://www.uniprot.org/uniprot/P23129 P23129]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-7222 PWY-7222]
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** [http://www.uniprot.org/uniprot/Q02218 Q02218]
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{{#set: common name=guanosine deoxyribonucleotides de novo biosynthesis II}}
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** [http://www.uniprot.org/uniprot/Q60597 Q60597]
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{{#set: taxonomic range=TAX-2}}
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** [http://www.uniprot.org/uniprot/Q9JRJ8 Q9JRJ8]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P20967 P20967]
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{{#set: total reaction=4}}
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** [http://www.uniprot.org/uniprot/P0AFG3 P0AFG3]
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{{#set: completion rate=75.0}}
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** [http://www.uniprot.org/uniprot/P20707 P20707]
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** [http://www.uniprot.org/uniprot/P51056 P51056]
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** [http://www.uniprot.org/uniprot/Q56600 Q56600]
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** [http://www.uniprot.org/uniprot/O49541 O49541]
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** [http://www.uniprot.org/uniprot/Q59106 Q59106]
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** [http://www.uniprot.org/uniprot/Q9M2T8 Q9M2T8]
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** [http://www.uniprot.org/uniprot/Q9ZRQ2 Q9ZRQ2]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=dihydrolipoamide dehydrogenase}}
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{{#set: common name=2-oxoglutarate dehydrogenase, E1 component}}
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{{#set: ec number=EC-1.2.4.2}}
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{{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}}
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{{#set: gene associated=CHC_T00010287001_1|CHC_T00008441001|CHC_T00008312001_1|CHC_T00008441001_1|CHC_T00008312001}}
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{{#set: in pathway=PWY66-398|PWY-5084}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:53, 9 January 2019

Pathway PWY-7222

  • common name:
    • guanosine deoxyribonucleotides de novo biosynthesis II
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7222&oldid=22416"