Difference between revisions of "RXN-12086"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Putativ...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12086 RXN-12086] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Putative Acyl-COA dehydrogenase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
+
** [http://enzyme.expasy.org/EC/3.1.1.3 EC-3.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
−
** fatty acyl coenzyme A dehydrogenase
 
−
** acyl coenzyme A dehydrogenase
 
−
** fatty-acyl-CoA dehydrogenase
 
−
** general acyl CoA dehydrogenase
 
−
** medium-chain acyl-coenzyme A dehydrogenase
 
−
** long-chain acyl coenzyme A dehydrogenase
 
−
** long-chain acyl-CoA dehydrogenase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[TRANS-D2-ENOYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c]
+
** 1 [[CPD-13014]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[BUTYRIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-13040]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''=>''' 1 a trans-2-enoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
** 1 tributyrin[c] '''+''' 1 H2O[c] '''=>''' 1 butanoate[c] '''+''' 1 H+[c] '''+''' 1 1,2-dibutyrin[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009166001_1]]
+
* Gene: [[CHC_T00000198001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00009166001]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** ORIGINAL_GENOME
+
* Gene: [[CHC_T00000197001_1]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00005737001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009491001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00002434001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009452001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00000853001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008615001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P16219 P16219]
 
−
** [http://www.uniprot.org/uniprot/P45952 P45952]
 
−
** [http://www.uniprot.org/uniprot/P15651 P15651]
 
−
** [http://www.uniprot.org/uniprot/P11310 P11310]
 
−
** [http://www.uniprot.org/uniprot/P08503 P08503]
 
−
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 
−
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 
−
** [http://www.uniprot.org/uniprot/P45867 P45867]
 
−
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 
−
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 
−
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Putative Acyl-COA dehydrogenase}}
+
{{#set: ec number=EC-3.1.1.3}}
−
{{#set: ec number=EC-1.3.8}}
+
{{#set: gene associated=CHC_T00000198001_1|CHC_T00000197001_1|CHC_T00005737001_1|CHC_T00009491001_1|CHC_T00002434001_1|CHC_T00009452001_1|CHC_T00000853001_1|CHC_T00008615001_1}}
−
{{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
+
{{#set: in pathway=}}
−
{{#set: gene associated=CHC_T00009166001_1|CHC_T00009166001}}
+
−
{{#set: in pathway=FAO-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 17:59, 9 January 2019

Reaction RXN-12086

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12086&oldid=22552"