Difference between revisions of "PWY490-3"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11575 RXN-11575] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11575 RXN-11575] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3] ==
* direction:
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* common name:
** LEFT-TO-RIGHT
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** nitrate reduction VI (assimilatory)
* ec number:
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* taxonomic range:
** [http://enzyme.expasy.org/EC/4.2.3.49 EC-4.2.3.49]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 
* Synonym(s):
 
* Synonym(s):
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** nitrate assimilation
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''4''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[CPD-8843]][c] '''+''' 1 [[PPI]][c]
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
* With common name(s):
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** 1 associated gene(s):
** 1 H2O[c] '''+''' 1 (2E,6E)-farnesyl diphosphate[c] '''=>''' 1 (3R,6E)-nerolidol[c] '''+''' 1 diphosphate[c]
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*** [[CHC_T00003048001_1]]
 
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** 3 reconstruction source(s) associated:
== Genes associated with this reaction  ==
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*** [[orthology-galdieria.sulphuraria]]
== Pathways  ==
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*** [[orthology-arabidopsis_thaliana]]
* [[PWY-5434]], (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5434 PWY-5434]
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*** [[orthology-ectocarpus_siliculosus]]
** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[GLUTAMINESYN-RXN]]
== Reconstruction information  ==
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** 3 associated gene(s):
* [[gap-filling]]:
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*** [[CHC_T00005454001_1]]
** [[meneco]]:
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*** [[CHC_T00010135001_1]]
*** [[added for gapfilling]]
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*** [[CHC_T00005451001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[GLUTDEHYD-RXN]]
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** 2 associated gene(s):
 +
*** [[CHC_T00010235001]]
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*** [[CHC_T00010235001_1]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=1.7.7.2-RXN 1.7.7.2-RXN]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=nitrate reduction VI (assimilatory)}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27534 27534]
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{{#set: taxonomic range=TAX-1117}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=nitrate assimilation}}
{{#set: ec number=EC-4.2.3.49}}
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{{#set: reaction found=3}}
{{#set: in pathway=PWY-5434}}
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{{#set: total reaction=4}}
{{#set: reconstruction category=gap-filling}}
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{{#set: completion rate=75.0}}
{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction source=added for gapfilling}}
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Latest revision as of 14:57, 9 January 2019

Pathway PWY490-3

  • common name:
    • nitrate reduction VI (assimilatory)
  • taxonomic range:
  • Synonym(s):
    • nitrate assimilation

Reaction(s) found

3 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links