Difference between revisions of "PWY-5913"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-AMINO-BUTYRATE 4-AMINO-BUTYRATE] == * smiles: ** C(C[N+])CC([O-])=O * inchi key: ** InChIKey=...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-AMINO-BUTYRATE 4-AMINO-BUTYRATE] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913] ==
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* smiles:
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** C(C[N+])CC([O-])=O
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* inchi key:
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** InChIKey=BTCSSZJGUNDROE-UHFFFAOYSA-N
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* common name:
 
* common name:
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** 4-aminobutanoate
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** partial TCA cycle (obligate autotrophs)
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* molecular weight:
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* taxonomic range:
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** 103.121   
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1118 TAX-1118]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1217 TAX-1217]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 
* Synonym(s):
 
* Synonym(s):
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** 4-NH2-but
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** TCA cycle VI (obligate autotrophs)
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** 4-NH3-but
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** GABA
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** 4-aminobutyric acid
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** γ-aminobutyrate
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** 4-amino-n-butyric acid
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** γ-amino-n-butyric acid
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** gamma-amino-N-butyrate
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** g-amino-n-butyric acid
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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== Reaction(s) known to produce the compound ==
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'''10''' reactions found over '''11''' reactions in the full pathway
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* [[RXN0-3942]]
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* [[ACONITATEDEHYDR-RXN]]
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== Reaction(s) of unknown directionality ==
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** 3 associated gene(s):
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* [[RXN-14209]]
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*** [[CHC_T00009087001_1]]
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*** [[CHC_T00008781001_1]]
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*** [[CHC_T00008781001]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[ACONITATEHYDR-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00009087001_1]]
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*** [[CHC_T00008781001]]
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*** [[CHC_T00008781001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[ASPAMINOTRANS-RXN]]
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** 8 associated gene(s):
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*** [[CHC_T00010017001]]
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*** [[CHC_T00005085001_1]]
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*** [[CHC_T00008432001]]
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*** [[CHC_T00006498001_1]]
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*** [[CHC_T00009477001]]
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*** [[CHC_T00003344001_1]]
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*** [[CHC_T00009477001_1]]
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*** [[CHC_T00010197001]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CITSYN-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00007817001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00008951001_1]]
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*** [[CHC_T00008951001]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[GLUTDEHYD-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00010235001]]
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*** [[CHC_T00010235001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[ISOCITDEH-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00009580001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[MALATE-DEH-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00009292001_1]]
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*** [[CHC_T00008733001_1]]
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*** [[CHC_T00008600001_1]]
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*** [[CHC_T00008733001]]
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*** [[CHC_T00009350001_1]]
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*** [[CHC_T00009173001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PEPCARBOX-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00008437001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00009212001_1]]
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*** [[CHC_T00008602001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14970 RXN-14970]
 
== External links  ==
 
== External links  ==
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* CAS : 56-12-2
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{{#set: common name=partial TCA cycle (obligate autotrophs)}}
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* METABOLIGHTS : MTBLC59888
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{{#set: taxonomic range=TAX-1118}}
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* PUBCHEM:
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{{#set: taxonomic range=TAX-1217}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6992099 6992099]
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{{#set: taxonomic range=TAX-1224}}
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* HMDB : HMDB00112
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{{#set: common name=TCA cycle VI (obligate autotrophs)}}
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* LIGAND-CPD:
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{{#set: reaction found=10}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00334 C00334]
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{{#set: total reaction=11}}
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* CHEBI:
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{{#set: completion rate=91.0}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=59888 59888]
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* BIGG : 4abut
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{{#set: smiles=C(C[N+])CC([O-])=O}}
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{{#set: inchi key=InChIKey=BTCSSZJGUNDROE-UHFFFAOYSA-N}}
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{{#set: common name=4-aminobutanoate}}
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{{#set: molecular weight=103.121    }}
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{{#set: common name=4-NH2-but|4-NH3-but|GABA|4-aminobutyric acid|γ-aminobutyrate|4-amino-n-butyric acid|γ-amino-n-butyric acid|gamma-amino-N-butyrate|g-amino-n-butyric acid}}
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{{#set: produced by=RXN0-3942}}
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{{#set: consumed or produced by=RXN-14209}}
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Latest revision as of 14:59, 9 January 2019

Pathway PWY-5913

  • common name:
    • partial TCA cycle (obligate autotrophs)
  • taxonomic range:
  • Synonym(s):
    • TCA cycle VI (obligate autotrophs)

Reaction(s) found

10 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5913&oldid=19660"