Difference between revisions of "RXN-12588"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12588 RXN-12588] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** histidine tRNA synthetase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.21 EC-6.1.1.21]
+
** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[HIS-tRNAs]][c] '''+''' 1 [[HIS]][c] '''=>''' 1 [[Charged-HIS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[CYS]][c] '''=>''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 a tRNAhis[c] '''+''' 1 L-histidine[c] '''=>''' 1 an L-histidyl-[tRNAhis][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 an unsulfurated [sulfur carrier][c] '''+''' 1 L-cysteine[c] '''=>''' 1 a sulfurated [sulfur carrier][c] '''+''' 1 L-alanine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00004806001_1]]
+
* Gene: [[CHC_T00008053001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_255]]
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** Source: [[orthology-ectocarpus_siliculosus]]
−
** ORIGINAL_GENOME
+
* Gene: [[CHC_T00000657001_1]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009510001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17313 17313]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03655 R03655]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9X0H5 Q9X0H5]
 
−
** [http://www.uniprot.org/uniprot/O58028 O58028]
 
−
** [http://www.uniprot.org/uniprot/O67223 O67223]
 
−
** [http://www.uniprot.org/uniprot/Q9ZK27 Q9ZK27]
 
−
** [http://www.uniprot.org/uniprot/Q9PPF4 Q9PPF4]
 
−
** [http://www.uniprot.org/uniprot/P56455 P56455]
 
−
** [http://www.uniprot.org/uniprot/Q58406 Q58406]
 
−
** [http://www.uniprot.org/uniprot/O32039 O32039]
 
−
** [http://www.uniprot.org/uniprot/O51160 O51160]
 
−
** [http://www.uniprot.org/uniprot/O66522 O66522]
 
−
** [http://www.uniprot.org/uniprot/Q9ZDL9 Q9ZDL9]
 
−
** [http://www.uniprot.org/uniprot/Q9JUZ9 Q9JUZ9]
 
−
** [http://www.uniprot.org/uniprot/Q9CE78 Q9CE78]
 
−
** [http://www.uniprot.org/uniprot/P47281 P47281]
 
−
** [http://www.uniprot.org/uniprot/O34459 O34459]
 
−
** [http://www.uniprot.org/uniprot/O83647 O83647]
 
−
** [http://www.uniprot.org/uniprot/O84547 O84547]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7P1 Q9Z7P1]
 
−
** [http://www.uniprot.org/uniprot/P43823 P43823]
 
−
** [http://www.uniprot.org/uniprot/Q61035 Q61035]
 
−
** [http://www.uniprot.org/uniprot/P30053 P30053]
 
−
** [http://www.uniprot.org/uniprot/P46696 P46696]
 
−
** [http://www.uniprot.org/uniprot/P51348 P51348]
 
−
** [http://www.uniprot.org/uniprot/P75069 P75069]
 
−
** [http://www.uniprot.org/uniprot/Q55653 Q55653]
 
−
** [http://www.uniprot.org/uniprot/Q49027 Q49027]
 
−
** [http://www.uniprot.org/uniprot/P07263 P07263]
 
−
** [http://www.uniprot.org/uniprot/P60906 P60906]
 
−
** [http://www.uniprot.org/uniprot/P12081 P12081]
 
−
** [http://www.uniprot.org/uniprot/P93422 P93422]
 
−
** [http://www.uniprot.org/uniprot/O82413 O82413]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=histidine tRNA synthetase}}
+
{{#set: ec number=EC-2.8.1.7}}
−
{{#set: ec number=EC-6.1.1.21}}
+
{{#set: gene associated=CHC_T00008053001_1|CHC_T00000657001_1|CHC_T00009510001_1}}
−
{{#set: gene associated=CHC_T00004806001_1|CHC_255}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 15:07, 9 January 2019

Reaction RXN-12588

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12588&oldid=19855"