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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSINE--TRNA-LIGASE-RXN LYSINE--TRNA-LIGASE-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Uracil16-in-tRNAs Uracil16-in-tRNAs] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Lysyl-tRNA synthetase | + | ** a uracil16 in tRNA |
| − | ** lysine--tRNA ligase, cytoplasmic
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.6 EC-6.1.1.6]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[RXN-12454]] |
| − | ** 1 [[LYS]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LYS-tRNAs]][c] '''=>''' 1 [[Charged-LYS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 L-lysine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAlys[c] '''=>''' 1 an L-lysyl-[tRNAlys][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[CHC_T00008735001_1]] | + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | * [[CHC_T00008917001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00008917001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | == Pathways == | + | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
| + | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * LIGAND-RXN:
| + | {{#set: common name=a uracil16 in tRNA}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03658 R03658]
| + | {{#set: consumed by=RXN-12454}} |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41258 P41258]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P46861 P46861]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47382 P47382]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O57963 O57963]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51603 O51603]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JTT7 Q9JTT7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83650 O83650]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X231 Q9X231]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43825 P43825]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZDF8 Q9ZDF8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84786 O84786]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z6X5 Q9Z6X5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CII7 Q9CII7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56126 P56126]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZMP8 Q9ZMP8]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67258 O67258]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O84002 O84002]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9RHV9 Q9RHV9]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P32048 P32048]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P37879 P37879]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q48986 Q48986]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A8N7 P0A8N7]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P37477 P37477]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75500 P75500]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P95970 P95970]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P73443 P73443]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P15180 P15180]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A8N3 P0A8N3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P0A8N5 P0A8N5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43776 Q43776]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O74059 O74059]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O30522 O30522]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=Lysyl-tRNA synthetase}} | + | |
| − | {{#set: common name=lysine--tRNA ligase, cytoplasmic}} | + | |
| − | {{#set: ec number=EC-6.1.1.6}}
| + | |
| − | {{#set: gene associated=CHC_T00008735001_1|CHC_T00008917001|CHC_T00008917001_1}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
