Difference between revisions of "ANAGLYCOLYSIS-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5468 RXN-5468] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5468 RXN-5468] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** glycolysis III (from glucose)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.4.1.260 EC-2.4.1.260]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
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** anaerobic glycolysis
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** Embden-Meyerhof-Parnas pathway
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** EMP pathway
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** glycolysis III (glucokinase)
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''10''' reactions found over '''10''' reactions in the full pathway
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** 1 [[CPD-171]][c] '''+''' 1 [[CPD-5166]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-5167]][c]
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* [[2PGADEHYDRAT-RXN]]
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* With common name(s):
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** 5 associated gene(s):
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** 1 a dolichyl β-D-mannosyl phosphate[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 α-D-Man-a-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
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*** [[CHC_T00008696001]]
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*** [[CHC_T00008696001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00009127001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[CHC_T00008490001]]
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* [[CHC_T00009193001_1]]
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*** [[CHC_T00009127001]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 4 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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*** [[annotation-original_genome]]
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** '''12''' reactions found over '''19''' reactions in the full pathway
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*** [[orthology-arabidopsis_thaliana]]
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== Reconstruction information  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[orthology]]:
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* [[6PFRUCTPHOS-RXN]]
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** [[pantograph]]:
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** 3 associated gene(s):
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00009387001_1]]
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*** [[CHC_T00008955001]]
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*** [[CHC_T00007415001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[F16ALDOLASE-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00008586001]]
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*** [[CHC_T00008586001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[GAPOXNPHOSPHN-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00009438001_1]]
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*** [[CHC_T00009523001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[GLUCOKIN-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00001373001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PEPDEPHOS-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00008530001]]
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*** [[CHC_T00008652001]]
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*** [[CHC_T00008652001_1]]
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*** [[CHC_T00008482001_1]]
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*** [[CHC_T00008482001]]
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*** [[CHC_T00008530001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00009370001]]
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*** [[CHC_T00009370001_1]]
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*** [[CHC_T00008268001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PHOSGLYPHOS-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00004105001_1]]
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*** [[CHC_T00009179001]]
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*** [[CHC_T00009179001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-15513]]
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** 5 associated gene(s):
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*** [[CHC_T00007707001_1]]
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*** [[CHC_T00000449001_1]]
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*** [[CHC_T00001519001_1]]
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*** [[CHC_T00001241001_1]]
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*** [[CHC_T00004201001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[TRIOSEPISOMERIZATION-RXN]]
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** 5 associated gene(s):
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*** [[CHC_T00009126001_1]]
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*** [[CHC_T00009523001_1]]
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*** [[CHC_T00009126001]]
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*** [[CHC_T00009545001]]
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*** [[CHC_T00009545001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=glycolysis III (from glucose)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29538 29538]
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{{#set: taxonomic range=TAX-2759}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06260 R06260]
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{{#set: common name=anaerobic glycolysis|Embden-Meyerhof-Parnas pathway|EMP pathway|glycolysis III (glucokinase)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=10}}
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{{#set: ec number=EC-2.4.1.260}}
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{{#set: total reaction=10}}
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{{#set: gene associated=CHC_T00009193001_1}}
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{{#set: completion rate=100.0}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 15:06, 9 January 2019

Pathway ANAGLYCOLYSIS-PWY

  • common name:
    • glycolysis III (from glucose)
  • taxonomic range:
  • Synonym(s):
    • anaerobic glycolysis
    • Embden-Meyerhof-Parnas pathway
    • EMP pathway
    • glycolysis III (glucokinase)

Reaction(s) found

10 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=ANAGLYCOLYSIS-PWY&oldid=19818"