Difference between revisions of "5.3.4.1-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHBUTYRYL-COA-EPIM-RXN OHBUTYRYL-COA-EPIM-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHBUTYRYL-COA-EPIM-RXN OHBUTYRYL-COA-EPIM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.3.4.1-RXN 5.3.4.1-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.1.2.3 EC-5.1.2.3]
+
** [http://enzyme.expasy.org/EC/5.3.4.1 EC-5.3.4.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[D-3-HYDROXYACYL-COA]][c] '''<=>''' 1 [[L-3-HYDROXYACYL-COA]][c]
+
** 1 [[Proteins-with-incorrect-disulfides]][c] '''<=>''' 1 [[Proteins-with-correct-disulfides]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxyacyl-CoA[c] '''<=>''' 1 a (3S)-3-hydroxyacyl-CoA[c]
+
** 1 a protein with incorrect disulfide bonds[c] '''<=>''' 1 a protein with correct disulfide bonds[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009422001_1]]
+
* Gene: [[CHC_T00006120001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00009349001_1]]
+
* Gene: [[CHC_T00008734001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008968001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00004331001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008626001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00009389001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5138]], unsaturated, even numbered fatty acid &beta;-oxidation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5138 PWY-5138]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FAO-PWY]], fatty acid &beta;-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34083 34083]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
+
** [http://www.uniprot.org/uniprot/P13667 P13667]
 +
** [http://www.uniprot.org/uniprot/P11598 P11598]
 +
** [http://www.uniprot.org/uniprot/P21195 P21195]
 +
** [http://www.uniprot.org/uniprot/P0AEG4 P0AEG4]
 +
** [http://www.uniprot.org/uniprot/P29828 P29828]
 +
** [http://www.uniprot.org/uniprot/P32557 P32557]
 +
** [http://www.uniprot.org/uniprot/Q27780 Q27780]
 +
** [http://www.uniprot.org/uniprot/P31810 P31810]
 +
** [http://www.uniprot.org/uniprot/Q9PDE2 Q9PDE2]
 +
** [http://www.uniprot.org/uniprot/O27777 O27777]
 +
** [http://www.uniprot.org/uniprot/Q9JSN7 Q9JSN7]
 +
** [http://www.uniprot.org/uniprot/P45111 P45111]
 +
** [http://www.uniprot.org/uniprot/P0AEG6 P0AEG6]
 +
** [http://www.uniprot.org/uniprot/O68904 O68904]
 +
** [http://www.uniprot.org/uniprot/Q9PCE7 Q9PCE7]
 +
** [http://www.uniprot.org/uniprot/Q9PDF5 Q9PDF5]
 +
** [http://www.uniprot.org/uniprot/Q9JSY5 Q9JSY5]
 +
** [http://www.uniprot.org/uniprot/Q9KPF0 Q9KPF0]
 +
** [http://www.uniprot.org/uniprot/P95460 P95460]
 +
** [http://www.uniprot.org/uniprot/P05307 P05307]
 +
** [http://www.uniprot.org/uniprot/P17967 P17967]
 +
** [http://www.uniprot.org/uniprot/P09102 P09102]
 +
** [http://www.uniprot.org/uniprot/P07237 P07237]
 +
** [http://www.uniprot.org/uniprot/P08003 P08003]
 +
** [http://www.uniprot.org/uniprot/Q922C8 Q922C8]
 +
** [http://www.uniprot.org/uniprot/P04785 P04785]
 +
** [http://www.uniprot.org/uniprot/P55059 P55059]
 +
** [http://www.uniprot.org/uniprot/Q27553 Q27553]
 +
** [http://www.uniprot.org/uniprot/P30101 P30101]
 +
** [http://www.uniprot.org/uniprot/Q7M1Q4 Q7M1Q4]
 +
** [http://www.uniprot.org/uniprot/Q04815 Q04815]
 +
** [http://www.uniprot.org/uniprot/P39691 P39691]
 +
** [http://www.uniprot.org/uniprot/P34329 P34329]
 +
** [http://www.uniprot.org/uniprot/Q12730 Q12730]
 +
** [http://www.uniprot.org/uniprot/Q43116 Q43116]
 +
** [http://www.uniprot.org/uniprot/Q9TWZ1 Q9TWZ1]
 +
** [http://www.uniprot.org/uniprot/P52588 P52588]
 +
** [http://www.uniprot.org/uniprot/Q17967 Q17967]
 +
** [http://www.uniprot.org/uniprot/P52234 P52234]
 +
** [http://www.uniprot.org/uniprot/O22263 O22263]
 +
** [http://www.uniprot.org/uniprot/P93358 P93358]
 +
** [http://www.uniprot.org/uniprot/P80284 P80284]
 +
** [http://www.uniprot.org/uniprot/P52589 P52589]
 +
** [http://www.uniprot.org/uniprot/O48949 O48949]
 +
** [http://www.uniprot.org/uniprot/P38661 P38661]
 +
** [http://www.uniprot.org/uniprot/O13704 O13704]
 +
** [http://www.uniprot.org/uniprot/O13811 O13811]
 +
** [http://www.uniprot.org/uniprot/Q10057 Q10057]
 +
** [http://www.uniprot.org/uniprot/Q92249 Q92249]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-5.1.2.3}}
+
{{#set: ec number=EC-5.3.4.1}}
−
{{#set: gene associated=CHC_T00009422001_1|CHC_T00009349001_1}}
+
{{#set: gene associated=CHC_T00006120001_1|CHC_T00008734001_1|CHC_T00008968001_1|CHC_T00004331001_1|CHC_T00008626001_1|CHC_T00009389001_1}}
−
{{#set: in pathway=PWY-5138|FAO-PWY}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Latest revision as of 16:11, 9 January 2019

Reaction 5.3.4.1-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=5.3.4.1-RXN&oldid=19951"