Difference between revisions of "RXN-16042"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5P SHIKIMATE-5P] == * smiles: ** C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1) * inc...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16042 RXN-16042] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE-5P SHIKIMATE-5P] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16042 RXN-16042] ==
* smiles:
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* direction:
** C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1)
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** LEFT-TO-RIGHT
* inchi key:
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* ec number:
** InChIKey=QYOJSKGCWNAKGW-PBXRRBTRSA-K
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** [http://enzyme.expasy.org/EC/2.3.1.23 EC-2.3.1.23]
* common name:
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** shikimate 3-phosphate
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* molecular weight:
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** 251.109   
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* Synonym(s):
 
* Synonym(s):
** shikimate 5-phosphate
 
** shikimate-5-P
 
** 3-phosphoshikimate
 
** shikimate-3-P
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
== Reaction(s) of unknown directionality ==
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** 1 [[Glycerolipids]][c] '''+''' 1 [[CPD-14394]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17281]][c]
* [[2.5.1.19-RXN]]
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* With common name(s):
* [[SHIKIMATE-KINASE-RXN]]
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** 1 a glycerolipid[c] '''+''' 1 (8Z,11Z,14Z,17Z)-icosa-8,11,14,17-tetraenoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a [glycerolipid]-icosatetraenoate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00007447001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=14506806 14506806]
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{{#set: ec number=EC-2.3.1.23}}
* CHEBI:
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{{#set: gene associated=CHC_T00007447001_1}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=145989 145989]
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{{#set: in pathway=PWY-6958}}
* BIGG : skm5p
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{{#set: reconstruction category=orthology}}
* LIGAND-CPD:
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
** [http://www.genome.jp/dbget-bin/www_bget?C03175 C03175]
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{{#set: reconstruction tool=pantograph}}
{{#set: smiles=C(=O)([O-])C1(=CC(OP(=O)([O-])[O-])C(O)C(O)C1)}}
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{{#set: inchi key=InChIKey=QYOJSKGCWNAKGW-PBXRRBTRSA-K}}
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{{#set: common name=shikimate 3-phosphate}}
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{{#set: molecular weight=251.109    }}
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{{#set: common name=shikimate 5-phosphate|shikimate-5-P|3-phosphoshikimate|shikimate-3-P}}
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{{#set: consumed or produced by=2.5.1.19-RXN|SHIKIMATE-KINASE-RXN}}
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Latest revision as of 14:58, 23 May 2018

Reaction RXN-16042

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a glycerolipid[c] + 1 (8Z,11Z,14Z,17Z)-icosa-8,11,14,17-tetraenoyl-CoA[c] => 1 coenzyme A[c] + 1 a [glycerolipid]-icosatetraenoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links