Difference between revisions of "ACYLCOASYN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7418 CPD-7418] == * smiles: ** C(C=CC1(=C(C=CC=C1)O))(=O)[O-] * inchi key: ** InChIKey=PMOW...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7418 CPD-7418] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] ==
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* smiles:
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* direction:
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** C(C=CC1(=C(C=CC=C1)O))(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PMOWTIHVNWZYFI-WAYWQWQTSA-M
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* common name:
 
* common name:
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** coumarinate
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** 2,3,4-saturated fatty acyl-CoA synthetase
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* molecular weight:
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** long-chain-fatty-acid-CoA ligase
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** 163.152   
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** coumarinic acid
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** Acyl-activating enzyme
 +
** Fatty acid thiokinase (long-chain)
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-8036]]
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** 1 [[ATP]][c] '''+''' 1 [[CPD66-39]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
 +
** 1 ATP[c] '''+''' 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 coenzyme A[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009428001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008811001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008811001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008160001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008500001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009428001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54714352 54714352]
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** [http://www.uniprot.org/uniprot/P18163 P18163]
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* HMDB : HMDB41592
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** [http://www.uniprot.org/uniprot/P39518 P39518]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/O51162 O51162]
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** [http://www.genome.jp/dbget-bin/www_bget?C05838 C05838]
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** [http://www.uniprot.org/uniprot/P39002 P39002]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
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** [http://www.chemspider.com/Chemical-Structure.20118034.html 20118034]
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** [http://www.uniprot.org/uniprot/Q10776 Q10776]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O83181 O83181]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=47921 47921]
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** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
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* METABOLIGHTS : MTBLC47921
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** [http://www.uniprot.org/uniprot/P94547 P94547]
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{{#set: smiles=C(C=CC1(=C(C=CC=C1)O))(=O)[O-]}}
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** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
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{{#set: inchi key=InChIKey=PMOWTIHVNWZYFI-WAYWQWQTSA-M}}
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** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
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{{#set: common name=coumarinate}}
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** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
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{{#set: molecular weight=163.152    }}
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** [http://www.uniprot.org/uniprot/P44446 P44446]
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{{#set: common name=coumarinic acid}}
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** [http://www.uniprot.org/uniprot/O30039 O30039]
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{{#set: produced by=RXN-8036}}
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** [http://www.uniprot.org/uniprot/O51539 O51539]
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** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
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** [http://www.uniprot.org/uniprot/P33121 P33121]
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** [http://www.uniprot.org/uniprot/P33124 P33124]
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** [http://www.uniprot.org/uniprot/P30624 P30624]
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** [http://www.uniprot.org/uniprot/Q02602 Q02602]
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** [http://www.uniprot.org/uniprot/P69451 P69451]
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** [http://www.uniprot.org/uniprot/P69452 P69452]
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** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
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** [http://www.uniprot.org/uniprot/P47912 P47912]
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** [http://www.uniprot.org/uniprot/P73004 P73004]
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** [http://www.uniprot.org/uniprot/O81614 O81614]
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** [http://www.uniprot.org/uniprot/O15840 O15840]
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** [http://www.uniprot.org/uniprot/Q96537 Q96537]
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** [http://www.uniprot.org/uniprot/Q96538 Q96538]
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** [http://www.uniprot.org/uniprot/Q96338 Q96338]
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** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
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** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
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** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
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** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
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** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
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** [http://www.uniprot.org/uniprot/O60135 O60135]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
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{{#set: gene associated=CHC_T00009428001_1|CHC_T00008811001|CHC_T00008811001_1|CHC_T00008160001_1|CHC_T00008500001_1|CHC_T00009428001}}
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{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:24, 9 January 2019

Reaction ACYLCOASYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3,4-saturated fatty acyl-CoA synthetase
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):
    • Acyl-activating enzyme
    • Fatty acid thiokinase (long-chain)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 a 2,3,4-saturated fatty acid[c] + 1 coenzyme A[c] => 1 a 2,3,4-saturated fatty acyl CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 3 reactions found over 5 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=ACYLCOASYN-RXN&oldid=20252"