Difference between revisions of "RXN-9280"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9623 RXN-9623] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA lig...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9280 RXN-9280] == * direction: ** LEFT-TO-RIGHT * common name: ** octaprenyldihydroxybenzoate m...")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9623 RXN-9623] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9280 RXN-9280] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** long-chain-fatty-acid-CoA ligase
+
** octaprenyldihydroxybenzoate methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/2.1.1.114 EC-2.1.1.114]
 
* Synonym(s):
 
* Synonym(s):
 +
** 3-octaprenyl-4,5-dihydroxybenzoate methyltransferase
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PALMITATE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[CPD-9894]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-9899]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 palmitate[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 palmitoyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 3,4-dihydroxy-5-all-trans-octaprenylbenzoate[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 3-methoxy-4-hydroxy-5-all-trans-octaprenylbenzoate[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008500001_1]]
+
* Gene: [[CHC_T00007491001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008811001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009428001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008811001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009428001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008160001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
+
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30754 30754]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01280 R01280]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=long-chain-fatty-acid-CoA ligase}}
+
{{#set: common name=octaprenyldihydroxybenzoate methyltransferase}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: ec number=EC-2.1.1.114}}
−
{{#set: gene associated=CHC_T00008500001_1|CHC_T00008811001|CHC_T00009428001|CHC_T00008811001_1|CHC_T00009428001_1|CHC_T00008160001_1}}
+
{{#set: common name=3-octaprenyl-4,5-dihydroxybenzoate methyltransferase}}
−
{{#set: in pathway=PWY-5972|PWY-5971}}
+
{{#set: gene associated=CHC_T00007491001_1}}
 +
{{#set: in pathway=PWY-5870}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:04, 23 May 2018

Reaction RXN-9280

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • octaprenyldihydroxybenzoate methyltransferase
  • ec number:
  • Synonym(s):
    • 3-octaprenyl-4,5-dihydroxybenzoate methyltransferase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3,4-dihydroxy-5-all-trans-octaprenylbenzoate[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 3-methoxy-4-hydroxy-5-all-trans-octaprenylbenzoate[c] + 1 S-adenosyl-L-homocysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic): PWY-5870
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-9280&oldid=13082"