Difference between revisions of "RXN-646"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-580...")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-361 PWY-361] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-646 RXN-646] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** phenylpropanoid biosynthesis
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** [http://enzyme.expasy.org/EC/3.5.1.107 EC-3.5.1.107]
 
* Synonym(s):
 
* Synonym(s):
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** monolignol biosynthesis
 
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** lignin biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''6''' reaction(s) found
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* With identifiers:
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** [[RXN-1125]]
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** 1 [[WATER]][c] '''+''' 1 [[MALEAMATE]][c] '''=>''' 1 [[MALEATE]][c] '''+''' 1 [[AMMONIUM]][c]
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** [[RXN-1106]]
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* With common name(s):
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** [[RXN-1102]]
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** 1 H2O[c] '''+''' 1 maleamate[c] '''=>''' 1 maleate[c] '''+''' 1 ammonium[c]
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** [[RXN-1101]]
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** [[CAFFEOYL-COA-O-METHYLTRANSFERASE-RXN]]
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== Genes associated with this reaction  ==
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** [[4-COUMARATE--COA-LIGASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) not found ==
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* Gene: [[CHC_T00002303001_1]]
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* '''9''' reaction(s) not found
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** Source: [[orthology-arabidopsis_thaliana]]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2601 RXN-2601]
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== Pathways  ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2602 RXN-2602]
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* [[PWY-5033]], nicotinate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5033 PWY-5033]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2581 RXN-2581]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2622 RXN-2622]
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* [[PWY-722]], nicotinate degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-722 PWY-722]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-2621 RXN-2621]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=1.14.13.36-RXN 1.14.13.36-RXN]
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* [[PWY-7128]], nicotine degradation III (VPP pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7128 PWY-7128]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-1143 RXN-1143]
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** '''1''' reactions found over '''10''' reactions in the full pathway
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-1142 RXN-1142]
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* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
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** [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.133-RXN 2.3.1.133-RXN]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* ARACYC:
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* RHEA:
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-361 PWY-361]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27385 27385]
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{{#set: taxonomic range=TAX-58024}}
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* LIGAND-RXN:
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{{#set: common name=phenylpropanoid biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03540 R03540]
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{{#set: common name=monolignol biosynthesis|lignin biosynthesis}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction found=6}}
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{{#set: ec number=EC-3.5.1.107}}
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{{#set: reaction not found=9}}
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{{#set: gene associated=CHC_T00002303001_1}}
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{{#set: in pathway=PWY-5033|PWY-722|PWY-7128|PWY-6993}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:25, 9 January 2019

Reaction RXN-646

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 maleamate[c] => 1 maleate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5033, nicotinate degradation II: PWY-5033
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-722, nicotinate degradation I: PWY-722
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7128, nicotine degradation III (VPP pathway): PWY-7128
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-6993, nicotine degradation II (pyrrolidine pathway): PWY-6993
    • 2 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-646&oldid=20286"