Difference between revisions of "RXN-10780"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10780 RXN-10780] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
+
 
* common name:
 
* common name:
−
** phosphatidylglycerol biosynthesis II (non-plastidic)
+
** aldehyde dehydrogenase, (NAD) activity
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''3''' reaction(s) found
+
* With identifiers:
−
** [[PHOSPHAGLYPSYN-RXN]]
+
** 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETATE]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[NADH]][c]
−
** [[PWY-5667]]
+
* With common name(s):
−
** [[PGPPHOSPHA-RXN]]
+
** 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 5-hydroxyindole acetaldehyde[c] '''=>''' 1 5-hydroxyindole acetate[c] '''+''' 2 H+[c] '''+''' 1 NADH[c]
−
== Reaction(s) not found ==
+
 
−
* '''0''' reaction(s) not found
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00008575001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008341001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008341001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-6313]], serotonin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
* RHEA:
−
{{#set: taxonomic range=TAX-2}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31215 31215]
−
{{#set: common name=phosphatidylglycerol biosynthesis II (non-plastidic)}}
+
* LIGAND-RXN:
−
{{#set: reaction found=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
−
{{#set: reaction not found=0}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=aldehyde dehydrogenase, (NAD) activity}}
 +
{{#set: ec number=EC-1.2.1.3}}
 +
{{#set: gene associated=CHC_T00008575001_1|CHC_T00008341001_1|CHC_T00008341001}}
 +
{{#set: in pathway=PWY-6313}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:35, 9 January 2019

Reaction RXN-10780

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • aldehyde dehydrogenase, (NAD) activity
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6313, serotonin degradation: PWY-6313
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-10780&oldid=20500"