Difference between revisions of "RXN-2001"
From metabolic_network
(Created page with "Category:Gene == Gene CHC_T00008868001 == * left end position: ** 112896 * transcription direction: ** NEGATIVE * right end position: ** 114200 * centisome position: ** 68...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2001 RXN-2001] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * ec number: | |
| − | ** | + | ** [http://enzyme.expasy.org/EC/6.2.1 EC-6.2.1] |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** | + | ** 1 [[ATP]][c] '''+''' 1 [[CPD-674]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CINNAMOYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 ATP[c] '''+''' 1 trans-cinnamate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 (E)-cinnamoyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c] |
| − | * [[PWY- | + | |
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[CHC_T00008160001_1]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | * Gene: [[CHC_T00008472001_1]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | == Pathways == | ||
| + | * [[PWY-6457]], trans-cinnamoyl-CoA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6457 PWY-6457] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02255 R02255] |
| − | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: | + | {{#set: ec number=EC-6.2.1}} |
| − | {{#set: | + | {{#set: gene associated=CHC_T00008160001_1|CHC_T00008472001_1}} |
| − | {{#set: | + | {{#set: in pathway=PWY-6457}} |
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 15:17, 23 May 2018
Contents
Reaction RXN-2001
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 ATP[c] + 1 trans-cinnamate[c] + 1 coenzyme A[c] => 1 (E)-cinnamoyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008160001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008472001_1
- Source: orthology-arabidopsis_thaliana
Pathways
- PWY-6457, trans-cinnamoyl-CoA biosynthesis: PWY-6457
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
External links
- LIGAND-RXN:
