Difference between revisions of "GALACTOKIN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Deoxy-Ribonucleoside-Diphosphates Deoxy-Ribonucleoside-Diphosphates] == * common name: ** a 2'-...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Deoxy-Ribonucleoside-Diphosphates Deoxy-Ribonucleoside-Diphosphates] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] ==
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* common name:
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* direction:
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** a 2'-deoxyribonucleoside 5'-diphosphate
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** REVERSIBLE
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.6 EC-2.7.1.6]
 
* Synonym(s):
 
* Synonym(s):
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** a deoxyribonucleoside diphosphate
 
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** a deoxynucleoside diphosphate
 
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** 2'-deoxyribonucleoside diphosphate
 
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** deoxynucleoside diphosphate
 
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** deoxyribonucleoside diphosphate
 
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** a 2'-deoxyribonucleoside diphosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c] '''<=>''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 ATP[c] '''+''' 1 &alpha;-D-galactose[c] '''<=>''' 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00007304001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00006831001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00006828001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a 2'-deoxyribonucleoside 5'-diphosphate}}
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* RHEA:
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{{#set: common name=a deoxyribonucleoside diphosphate|a deoxynucleoside diphosphate|2'-deoxyribonucleoside diphosphate|deoxynucleoside diphosphate|deoxyribonucleoside diphosphate|a 2'-deoxyribonucleoside diphosphate}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13553 13553]
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{{#set: produced by=RIBONUCLEOSIDE-DIP-REDUCTI-RXN}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P09608 P09608]
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** [http://www.uniprot.org/uniprot/Q01415 Q01415]
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** [http://www.uniprot.org/uniprot/P22713 P22713]
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** [http://www.uniprot.org/uniprot/P31767 P31767]
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** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
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** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
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** [http://www.uniprot.org/uniprot/P96993 P96993]
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** [http://www.uniprot.org/uniprot/P04385 P04385]
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** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
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** [http://www.uniprot.org/uniprot/P13227 P13227]
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** [http://www.uniprot.org/uniprot/P39574 P39574]
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** [http://www.uniprot.org/uniprot/P13045 P13045]
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** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.7.1.6}}
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{{#set: gene associated=CHC_T00007304001_1|CHC_T00006831001_1|CHC_T00006828001_1}}
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{{#set: in pathway=PWY-6527|PWY-6317|PWY66-422|PWY-3821}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:50, 9 January 2019

Reaction GALACTOKIN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 α-D-galactose[c] <=> 1 α-D-galactose 1-phosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6527, stachyose degradation: PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-3821, D-galactose degradation III: PWY-3821
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GALACTOKIN-RXN&oldid=20876"