Difference between revisions of "1.6.5.4-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
 
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.6.5.4-RXN 1.6.5.4-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** coumarin biosynthesis (via 2-coumarate)
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** [http://enzyme.expasy.org/EC/1.6.5.4 EC-1.6.5.4]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[RXN-8036]]
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** 2 [[CPD-318]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NAD]][c] '''+''' 2 [[ASCORBATE]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''4''' reaction(s) not found
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** 2 monodehydroascorbate radical[c] '''+''' 1 NADH[c] '''=>''' 1 H+[c] '''+''' 1 NAD+[c] '''+''' 2 L-ascorbate[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.114-RXN 2.4.1.114-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-2-MONOOXYGENASE-RXN TRANS-CINNAMATE-2-MONOOXYGENASE-RXN]
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8035 RXN-8035]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037]
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* Gene: [[CHC_T00006866001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00004739001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-6370]], ascorbate recycling (cytosolic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6370 PWY-6370]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3398}}
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* RHEA:
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{{#set: common name=coumarin biosynthesis (via 2-coumarate)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14581 14581]
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{{#set: reaction found=1}}
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* UNIPROT:
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{{#set: reaction not found=4}}
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** [http://www.uniprot.org/uniprot/Q9S926 Q9S926]
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** [http://www.uniprot.org/uniprot/Q40977 Q40977]
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** [http://www.uniprot.org/uniprot/Q42711 Q42711]
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** [http://www.uniprot.org/uniprot/Q43497 Q43497]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00095 R00095]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.6.5.4}}
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{{#set: gene associated=CHC_T00006866001_1|CHC_T00004739001_1}}
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{{#set: in pathway=PWY-6370}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:14, 9 January 2019

Reaction 1.6.5.4-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 monodehydroascorbate radical[c] + 1 NADH[c] => 1 H+[c] + 1 NAD+[c] + 2 L-ascorbate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6370, ascorbate recycling (cytosolic): PWY-6370
    • 2 reactions found over 6 reactions in the full pathway

Reconstruction information

External links




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