Difference between revisions of "LEUCINE--TRNA-LIGASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADCLY-RXN ADCLY-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.1...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADCLY-RXN ADCLY-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LEUCINE--TRNA-LIGASE-RXN LEUCINE--TRNA-LIGASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** leucine--tRNA ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.3.38 EC-4.1.3.38]
+
** [http://enzyme.expasy.org/EC/6.1.1.4 EC-6.1.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[4-AMINO-4-DEOXYCHORISMATE]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[P-AMINO-BENZOATE]][c]
+
** 1 [[LEU-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LEU]][c] '''=>''' 1 [[Charged-LEU-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 4-amino-4-deoxychorismate[c] '''<=>''' 1 H+[c] '''+''' 1 pyruvate[c] '''+''' 1 4-aminobenzoate[c]
+
** 1 a tRNAleu[c] '''+''' 1 ATP[c] '''+''' 1 L-leucine[c] '''=>''' 1 an L-leucyl-[tRNAleu][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00009574001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00004313001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009574001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6543]], 4-aminobenzoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6543 PWY-6543]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[gap-filling]]:
+
* Category: [[orthology]]
−
** [[meneco]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[added for gapfilling]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16201 16201]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11688 11688]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O27552 O27552]
 +
** [http://www.uniprot.org/uniprot/P56457 P56457]
 +
** [http://www.uniprot.org/uniprot/O51267 O51267]
 +
** [http://www.uniprot.org/uniprot/O83595 O83595]
 +
** [http://www.uniprot.org/uniprot/O84211 O84211]
 +
** [http://www.uniprot.org/uniprot/Q9Z930 Q9Z930]
 +
** [http://www.uniprot.org/uniprot/P47508 P47508]
 +
** [http://www.uniprot.org/uniprot/P36430 P36430]
 +
** [http://www.uniprot.org/uniprot/O66680 O66680]
 +
** [http://www.uniprot.org/uniprot/O67646 O67646]
 +
** [http://www.uniprot.org/uniprot/Q9ZDB1 Q9ZDB1]
 +
** [http://www.uniprot.org/uniprot/Q9WY15 Q9WY15]
 +
** [http://www.uniprot.org/uniprot/Q9PNK3 Q9PNK3]
 +
** [http://www.uniprot.org/uniprot/Q9JW39 Q9JW39]
 +
** [http://www.uniprot.org/uniprot/Q9ZJ63 Q9ZJ63]
 +
** [http://www.uniprot.org/uniprot/Q9JXT2 Q9JXT2]
 +
** [http://www.uniprot.org/uniprot/P43827 P43827]
 +
** [http://www.uniprot.org/uniprot/O58698 O58698]
 +
** [http://www.uniprot.org/uniprot/Q9CHB6 Q9CHB6]
 +
** [http://www.uniprot.org/uniprot/P26637 P26637]
 +
** [http://www.uniprot.org/uniprot/P75398 P75398]
 +
** [http://www.uniprot.org/uniprot/P73274 P73274]
 +
** [http://www.uniprot.org/uniprot/Q48955 Q48955]
 +
** [http://www.uniprot.org/uniprot/Q48964 Q48964]
 +
** [http://www.uniprot.org/uniprot/Q49051 Q49051]
 +
** [http://www.uniprot.org/uniprot/P11325 P11325]
 +
** [http://www.uniprot.org/uniprot/P07813 P07813]
 +
** [http://www.uniprot.org/uniprot/P10857 P10857]
 +
** [http://www.uniprot.org/uniprot/P15181 P15181]
 +
** [http://www.uniprot.org/uniprot/Q50192 Q50192]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05553 R05553]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03657 R03657]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.3.38}}
+
{{#set: common name=leucine--tRNA ligase}}
−
{{#set: in pathway=PWY-6543}}
+
{{#set: ec number=EC-6.1.1.4}}
−
{{#set: reconstruction category=gap-filling}}
+
{{#set: gene associated=CHC_T00009574001_1|CHC_T00004313001_1|CHC_T00009574001}}
−
{{#set: reconstruction tool=meneco}}
+
{{#set: in pathway=TRNA-CHARGING-PWY}}
−
{{#set: reconstruction source=added for gapfilling}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:55, 9 January 2019

Reaction LEUCINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • leucine--tRNA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAleu[c] + 1 ATP[c] + 1 L-leucine[c] => 1 an L-leucyl-[tRNAleu][c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=LEUCINE--TRNA-LIGASE-RXN&oldid=21000"