Difference between revisions of "PWY-181"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16426 RXN-16426] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16426 RXN-16426] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-181 PWY-181] ==
−
* direction:
+
* common name:
−
** LEFT-TO-RIGHT
+
** photorespiration
 +
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-38254 TAX-38254]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2830 TAX-2830]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-543769 TAX-543769]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33634 TAX-33634]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3027 TAX-3027]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* Synonym(s):
 
* Synonym(s):
 +
** C2 photorespiratory carbon oxidation cycle
 +
** PCO cycle
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''6''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[N-ACETYL-D-GLUCOSAMINE-16-BIS-P]][c] '''+''' 1 [[Phosphoacetylglucosamine-Mutase]][c] '''=>''' 1 [[Phosphoacetylglucosamine-Mutase-P]][c] '''+''' 1 [[N-ACETYL-D-GLUCOSAMINE-1-P]][c]
+
* [[GLY3KIN-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 N-acetyl-D-glucosamine 1,6-bisphosphate[c] '''+''' 1 a phosphoacetylglucosamine mutase[c] '''=>''' 1 a phosphorylated phosphoacetylglucosamine mutase[c] '''+''' 1 N-acetyl-α-D-glucosamine 1-phosphate[c]
+
*** [[CHC_T00002505001_1]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-galdieria.sulphuraria]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00001867001_1]]
+
* [[GLYCERATE-DEHYDROGENASE-RXN]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** 2 associated gene(s):
−
== Pathways  ==
+
*** [[CHC_T00009559001]]
−
== Reconstruction information  ==
+
*** [[CHC_T00009559001_1]]
−
* [[orthology]]:
+
** 2 reconstruction source(s) associated:
−
** [[pantograph]]:
+
*** [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** [[annotation-original_genome]]
 +
* [[GLYOHMETRANS-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00009460001_1]]
 +
*** [[CHC_T00008323001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[GPH-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00008858001_1]]
 +
*** [[CHC_T00008678001]]
 +
*** [[CHC_T00008946001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-961]]
 +
** 2 associated gene(s):
 +
*** [[CHC_955]]
 +
*** [[CHC_950]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
* [[RXN-969]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00004702001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GCVMULTI-RXN GCVMULTI-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-AMINOTRANSFERASE-RXN GLYCINE-AMINOTRANSFERASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* METACYC:
−
{{#set: gene associated=CHC_T00001867001_1}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=PWY-181 PWY-181]
−
{{#set: in pathway=}}
+
{{#set: common name=photorespiration}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: taxonomic range=TAX-38254}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: taxonomic range=TAX-2830}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: taxonomic range=TAX-543769}}
 +
{{#set: taxonomic range=TAX-33634}}
 +
{{#set: taxonomic range=TAX-3027}}
 +
{{#set: taxonomic range=TAX-33682}}
 +
{{#set: taxonomic range=TAX-2763}}
 +
{{#set: taxonomic range=TAX-1117}}
 +
{{#set: taxonomic range=TAX-33090}}
 +
{{#set: common name=C2 photorespiratory carbon oxidation cycle|PCO cycle}}
 +
{{#set: reaction found=6}}
 +
{{#set: total reaction=9}}
 +
{{#set: completion rate=67.0}}

Latest revision as of 15:53, 9 January 2019

Pathway PWY-181

Reaction(s) found

6 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links








Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-181&oldid=20954"