Difference between revisions of "RXN-8042"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11519 CPD-11519] == * smiles: ** CCC=CCC4(C(=O)CCC(CCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11519 CPD-11519] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8042 RXN-8042] ==
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* smiles:
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* direction:
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** CCC=CCC4(C(=O)CCC(CCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=PDDHCVXPABQISO-PEUIIYGWSA-J
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* common name:
 
* common name:
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** OPC8-3-hydroxyacyl-CoA
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** Carotene isomerase
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* molecular weight:
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* ec number:
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** 1055.92   
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** [http://enzyme.expasy.org/EC/5.2.1.13 EC-5.2.1.13]
 
* Synonym(s):
 
* Synonym(s):
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** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-3-hydroxy-2-enoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-10698]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-7496]][c] '''=>''' 1 [[CPD1F-114]][c]
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* [[RXN-10697]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 prolycopene[c] '''=>''' 1 all-trans-lycopene[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008475001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008475001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44237307 44237307]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30974 30974]
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{{#set: smiles=CCC=CCC4(C(=O)CCC(CCCCCC(O)CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)}}
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* LIGAND-RXN:
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{{#set: inchi key=InChIKey=PDDHCVXPABQISO-PEUIIYGWSA-J}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07512 R07512]
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{{#set: common name=OPC8-3-hydroxyacyl-CoA}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: molecular weight=1055.92    }}
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{{#set: common name=Carotene isomerase}}
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{{#set: common name=3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-3-hydroxy-2-enoyl-CoA}}
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{{#set: ec number=EC-5.2.1.13}}
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{{#set: consumed by=RXN-10698}}
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{{#set: gene associated=CHC_T00008475001_1|CHC_T00008475001}}
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{{#set: produced by=RXN-10697}}
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{{#set: in pathway=PWY-6475}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:01, 9 January 2019

Reaction RXN-8042

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carotene isomerase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 prolycopene[c] => 1 all-trans-lycopene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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