Difference between revisions of "CPD-14424"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] == * direction: ** LEFT-TO-RIG...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14424 CPD-14424] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/5.4.99.12 EC-5.4.99.12]
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** 1091.996   
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* inchi key:
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** InChIKey=KIDYDCLNVXONEF-PYBSMVOOSA-J
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* common name:
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** (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA
 
* Synonym(s):
 
* Synonym(s):
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** (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosa-5,8,11,14,17-pentaenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13444]]
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** 1 [[tRNA-uridine-38-40]][c] '''=>''' 1 [[tRNA-pseudouridine-38-40]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-13443]]
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** 1 a uridine38-40 in tRNA[c] '''=>''' 1 a pseudouridine38-40 in tRNA[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00004120001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00006828001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00006204001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00006579001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00007304001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00001139001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00001402001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* CHEBI:
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** [http://www.genome.jp/dbget-bin/www_bget?R03020 R03020]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76460 76460]
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* UNIPROT:
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* PUBCHEM:
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** [http://www.uniprot.org/uniprot/Q59069 Q59069]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72551548 72551548]
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** [http://www.uniprot.org/uniprot/P47428 P47428]
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/P45291 P45291]
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{{#set: molecular weight=1091.996    }}
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** [http://www.uniprot.org/uniprot/Q45557 Q45557]
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{{#set: inchi key=InChIKey=KIDYDCLNVXONEF-PYBSMVOOSA-J}}
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** [http://www.uniprot.org/uniprot/Q50291 Q50291]
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{{#set: common name=(5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P53167 P53167]
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{{#set: common name=(5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosa-5,8,11,14,17-pentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q12211 Q12211]
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{{#set: consumed by=RXN-13444}}
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** [http://www.uniprot.org/uniprot/P73295 P73295]
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{{#set: produced by=RXN-13443}}
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** [http://www.uniprot.org/uniprot/P07649 P07649]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-5.4.99.12}}
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{{#set: gene associated=CHC_T00004120001_1|CHC_T00006828001_1|CHC_T00006204001_1|CHC_T00006579001_1|CHC_T00007304001_1|CHC_T00001139001_1|CHC_T00001402001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:11, 9 January 2019

Metabolite CPD-14424

  • smiles:
    • CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • molecular weight:
    • 1091.996
  • inchi key:
    • InChIKey=KIDYDCLNVXONEF-PYBSMVOOSA-J
  • common name:
    • (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA
  • Synonym(s):
    • (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosa-5,8,11,14,17-pentaenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.




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