Difference between revisions of "DTMPKI-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.105-RXN 3.4.21.105-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.21.105-RXN 3.4.21.105-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DTMPKI-RXN DTMPKI-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.4.21.105 EC-3.4.21.105]
+
** [http://enzyme.expasy.org/EC/2.7.4.12 EC-2.7.4.12]
 +
** [http://enzyme.expasy.org/EC/2.7.4.13 EC-2.7.4.13]
 +
** [http://enzyme.expasy.org/EC/2.7.4.9 EC-2.7.4.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[Type-1-transmemberane-domains]][c] '''=>''' 1 [[Cleaved-type-1-transmembrane-domains]][c]
+
** 1 [[TMP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 type-1 transmembrane domains[c] '''=>''' 1 cleaved type-1 transmembrane domains[c]
+
** 1 dTMP[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 dTDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00004116001_1]]
+
* Gene: [[CHC_T00002059001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 +
** '''12''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13517 13517]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q57741 Q57741]
 +
** [http://www.uniprot.org/uniprot/Q9PPF3 Q9PPF3]
 +
** [http://www.uniprot.org/uniprot/P0A720 P0A720]
 +
** [http://www.uniprot.org/uniprot/Q8X8H7 Q8X8H7]
 +
** [http://www.uniprot.org/uniprot/Q9JVE7 Q9JVE7]
 +
** [http://www.uniprot.org/uniprot/P33803 P33803]
 +
** [http://www.uniprot.org/uniprot/P42490 P42490]
 +
** [http://www.uniprot.org/uniprot/P00572 P00572]
 +
** [http://www.uniprot.org/uniprot/Q80HT9 Q80HT9]
 +
** [http://www.uniprot.org/uniprot/P68693 P68693]
 +
** [http://www.uniprot.org/uniprot/P23919 P23919]
 +
** [http://www.uniprot.org/uniprot/P36590 P36590]
 +
** [http://www.uniprot.org/uniprot/Q9RA29 Q9RA29]
 +
** [http://www.uniprot.org/uniprot/O81650 O81650]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02094 R02094]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.4.21.105}}
+
{{#set: ec number=EC-2.7.4.12}}
−
{{#set: gene associated=CHC_T00004116001_1}}
+
{{#set: ec number=EC-2.7.4.13}}
−
{{#set: in pathway=}}
+
{{#set: ec number=EC-2.7.4.9}}
 +
{{#set: gene associated=CHC_T00002059001_1}}
 +
{{#set: in pathway=PWY0-166|PWY-7197|PWY-7210|PWY-7184|PWY-7198|PWY-6545|PWY-7187}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Latest revision as of 16:16, 9 January 2019

Reaction DTMPKI-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dTMP[c] + 1 ATP[c] => 1 ADP[c] + 1 dTDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway
  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation: PWY-7197
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP: PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV: PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II: PWY-7187
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=DTMPKI-RXN&oldid=20068"