Difference between revisions of "RXN-9623"

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(Created page with "Category:Gene == Gene CHC_T00007484001_1 == * Synonym(s): == Reactions associated == * RXN-8665 ** pantograph-galdieria.sulphuraria == Pathways associated ==...")
 
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00007484001_1 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9623 RXN-9623] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** long-chain-fatty-acid-CoA ligase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-8665]]
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* With identifiers:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PALMITATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PALMITYL-COA]][c] '''+''' 1 [[AMP]][c]
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== Pathways associated ==
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* With common name(s):
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* [[PWY-7765]]
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 palmitate[c] '''=>''' 1 diphosphate[c] '''+''' 1 palmitoyl-CoA[c] '''+''' 1 AMP[c]
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* [[PWY-5651]]
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* [[TRPCAT-PWY]]
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== Genes associated with this reaction  ==
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* [[PWY-6309]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-7717]]
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* Gene: [[CHC_T00009428001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008811001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008811001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008500001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008160001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009428001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways ==
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* [[PWY-5972]], stearate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5972 PWY-5972]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=RXN-8665}}
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* RHEA:
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{{#set: pathway associated=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30754 30754]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01280 R01280]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: gene associated=CHC_T00009428001|CHC_T00008811001_1|CHC_T00008811001|CHC_T00008500001_1|CHC_T00008160001_1|CHC_T00009428001_1}}
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{{#set: in pathway=PWY-5972|PWY-5971}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:20, 9 January 2019

Reaction RXN-9623

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 palmitate[c] => 1 diphosphate[c] + 1 palmitoyl-CoA[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5972, stearate biosynthesis I (animals and fungi): PWY-5972
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links





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