Difference between revisions of "RXN0-6480"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14423 CPD-14423] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14423 CPD-14423] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6480 RXN0-6480] ==
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* smiles:
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* direction:
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** CCC=CCC=CCC=CCC=CCC=CCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=SLYKKQSPRFJDAF-HVGANWHPSA-J
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** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
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* common name:
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** 3-oxo-docosapentaenoyl-CoA
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* molecular weight:
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** 1089.98   
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* Synonym(s):
 
* Synonym(s):
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** (5Z,8Z,11Z,14Z,17Z)-3-oxo-docosa-5,8,11,14,17-pentaenoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-13443]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[CPD0-2354]][c] '''=>''' 1 [[tRNAs]][c] '''+''' 1 [[tRNA-fragment]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension[c] '''=>''' 1 an uncharged tRNA[c] '''+''' 1 a tRNA fragment[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00004542001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=71581097 71581097]
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{{#set: ec number=EC-3.1.26.5}}
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* CHEBI:
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{{#set: gene associated=CHC_T00004542001_1}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73863 73863]
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{{#set: in pathway=PWY0-1479}}
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=SLYKKQSPRFJDAF-HVGANWHPSA-J}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: common name=3-oxo-docosapentaenoyl-CoA}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: molecular weight=1089.98    }}
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{{#set: common name=(5Z,8Z,11Z,14Z,17Z)-3-oxo-docosa-5,8,11,14,17-pentaenoyl-CoA}}
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{{#set: consumed by=RXN-13443}}
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Latest revision as of 15:51, 23 May 2018

Reaction RXN0-6480

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 a tRNA precursor with a 5' extension[c] => 1 an uncharged tRNA[c] + 1 a tRNA fragment[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1479, tRNA processing: PWY0-1479
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-6480&oldid=15488"