Difference between revisions of "PWY-5744"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE SHIKIMATE] == * smiles: ** C1(=C(CC(C(O)C(O)1)O)C(=O)[O-]) * inchi key: ** InChIKey=J...")
 
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[[Category:Metabolite]]
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[[Category:Pathway]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SHIKIMATE SHIKIMATE] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744] ==
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* smiles:
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** C1(=C(CC(C(O)C(O)1)O)C(=O)[O-])
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* inchi key:
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** InChIKey=JXOHGGNKMLTUBP-HSUXUTPPSA-M
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* common name:
 
* common name:
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** shikimate
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** glyoxylate assimilation
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* molecular weight:
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* taxonomic range:
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** 173.145   
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200795 TAX-200795]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
 
* Synonym(s):
 
* Synonym(s):
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** shikimic acid
 
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** (3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction(s) found ==
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* [[RXN-7968]]
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'''2''' reactions found over '''13''' reactions in the full pathway
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== Reaction(s) known to produce the compound ==
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* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
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** 8 associated gene(s):
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== Reaction(s) of unknown directionality ==
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*** [[CHC_T00009359001_1]]
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* [[SHIKIMATE-KINASE-RXN]]
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*** [[CHC_640]]
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*** [[CHC_T00009359001]]
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*** [[CHC_T00008359001]]
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*** [[CHC_T00009426001_1]]
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*** [[CHC_T00008359001_1]]
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*** [[CHC_T00007145001_1]]
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*** [[CHC_55]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-6383]]
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** 3 associated gene(s):
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*** [[CHC_T00009110001_1]]
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*** [[CHC_T00008882001_1]]
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*** [[CHC_T00009349001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=BIOTIN-CARBOXYL-RXN BIOTIN-CARBOXYL-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=CITRAMALYL-COA-LYASE-RXN CITRAMALYL-COA-LYASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13230 RXN-13230]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8960 RXN-8960]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8961 RXN-8961]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8963 RXN-8963]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8965 RXN-8965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8974 RXN-8974]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9086 RXN-9086]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9087 RXN-9087]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5055 RXN0-5055]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5224 RXN0-5224]
 
== External links  ==
 
== External links  ==
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* CAS : 138-59-0
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{{#set: common name=glyoxylate assimilation}}
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* PUBCHEM:
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{{#set: taxonomic range=TAX-200795}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7057976 7057976]
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{{#set: taxonomic range=TAX-183924}}
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* HMDB : HMDB03070
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{{#set: reaction found=2}}
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* LIGAND-CPD:
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{{#set: total reaction=13}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00493 C00493]
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{{#set: completion rate=15.0}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.5414360.html 5414360]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=36208 36208]
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* BIGG : skm
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{{#set: smiles=C1(=C(CC(C(O)C(O)1)O)C(=O)[O-])}}
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{{#set: inchi key=InChIKey=JXOHGGNKMLTUBP-HSUXUTPPSA-M}}
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{{#set: common name=shikimate}}
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{{#set: molecular weight=173.145    }}
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{{#set: common name=shikimic acid|(3R,4S,5R)--3,4,5-trihydroxycyclohex-1-ene-1-carboxylate}}
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{{#set: consumed by=RXN-7968}}
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{{#set: produced by=SHIKIMATE-5-DEHYDROGENASE-RXN}}
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{{#set: consumed or produced by=SHIKIMATE-KINASE-RXN}}
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Latest revision as of 16:25, 9 January 2019

Pathway PWY-5744

Reaction(s) found

2 reactions found over 13 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5744&oldid=21717"