Difference between revisions of "5.99.1.2-RXN"

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(Created page with "Category:Gene == Gene CHC_T00004399001_1 == * Synonym(s): == Reactions associated == * RXN-15556 ** pantograph-galdieria.sulphuraria * UBIQUITIN--PROTEIN-LI...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00004399001_1 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=5.99.1.2-RXN 5.99.1.2-RXN] ==
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* direction:
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** REVERSIBLE
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* common name:
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** DNA topoisomerase I Mitochondrial
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** Putative DNA topoisomerase I
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** DNA topoisomerase
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* ec number:
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** [http://enzyme.expasy.org/EC/5.99.1.2 EC-5.99.1.2]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15556]]
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* With identifiers:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 [[Negatively-super-coiled-DNAs]][c] '''<=>''' 1 [[Relaxed-DNAs]][c]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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* With common name(s):
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 a negatively supercoiled DNA[c] '''<=>''' 1 a relaxed DNA[c]
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== Pathways associated ==
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* [[PWY-7511]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00007354001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00006880001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008867001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010204001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00002964001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008579001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00010204001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008579001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: reaction associated=RXN-15556|UBIQUITIN--PROTEIN-LIGASE-RXN}}
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* UNIPROT:
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{{#set: pathway associated=PWY-7511}}
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** [http://www.uniprot.org/uniprot/Q7M0H8 Q7M0H8]
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** [http://www.uniprot.org/uniprot/Q07050 Q07050]
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** [http://www.uniprot.org/uniprot/Q9JWZ5 Q9JWZ5]
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** [http://www.uniprot.org/uniprot/Q59046 Q59046]
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** [http://www.uniprot.org/uniprot/Q9PLZ2 Q9PLZ2]
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** [http://www.uniprot.org/uniprot/P47368 P47368]
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** [http://www.uniprot.org/uniprot/Q9CG80 Q9CG80]
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** [http://www.uniprot.org/uniprot/P43704 P43704]
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** [http://www.uniprot.org/uniprot/P43012 P43012]
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** [http://www.uniprot.org/uniprot/P0A620 P0A620]
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** [http://www.uniprot.org/uniprot/P04786 P04786]
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** [http://www.uniprot.org/uniprot/P13099 P13099]
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** [http://www.uniprot.org/uniprot/P06612 P06612]
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** [http://www.uniprot.org/uniprot/P11387 P11387]
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** [http://www.uniprot.org/uniprot/P07799 P07799]
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** [http://www.uniprot.org/uniprot/P93119 P93119]
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** [http://www.uniprot.org/uniprot/O13463 O13463]
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** [http://www.uniprot.org/uniprot/Q94705 Q94705]
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** [http://www.uniprot.org/uniprot/Q04750 Q04750]
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** [http://www.uniprot.org/uniprot/P14294 P14294]
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** [http://www.uniprot.org/uniprot/P30181 P30181]
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** [http://www.uniprot.org/uniprot/P34185 P34185]
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** [http://www.uniprot.org/uniprot/P30189 P30189]
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** [http://www.uniprot.org/uniprot/P40114 P40114]
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** [http://www.uniprot.org/uniprot/P41511 P41511]
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** [http://www.uniprot.org/uniprot/Q8I3Z9 Q8I3Z9]
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** [http://www.uniprot.org/uniprot/Q26024 Q26024]
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** [http://www.uniprot.org/uniprot/Q27529 Q27529]
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** [http://www.uniprot.org/uniprot/P41512 P41512]
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** [http://www.uniprot.org/uniprot/O24307 O24307]
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** [http://www.uniprot.org/uniprot/P71196 P71196]
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** [http://www.uniprot.org/uniprot/O70157 O70157]
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** [http://www.uniprot.org/uniprot/O60126 O60126]
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** [http://www.uniprot.org/uniprot/O61660 O61660]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=DNA topoisomerase I Mitochondrial}}
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{{#set: common name=Putative DNA topoisomerase I}}
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{{#set: common name=DNA topoisomerase}}
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{{#set: ec number=EC-5.99.1.2}}
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{{#set: gene associated=CHC_T00007354001_1|CHC_T00006880001_1|CHC_T00008867001|CHC_T00010204001_1|CHC_T00002964001_1|CHC_T00008579001_1|CHC_T00010204001|CHC_T00008579001}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:33, 9 January 2019

Reaction 5.99.1.2-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • DNA topoisomerase I Mitochondrial
    • Putative DNA topoisomerase I
    • DNA topoisomerase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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