Difference between revisions of "FGAMSYN-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ISOBUTYRYL-COA ISOBUTYRYL-COA] == * smiles: ** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ISOBUTYRYL-COA ISOBUTYRYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGAMSYN-RXN FGAMSYN-RXN] ==
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* smiles:
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* direction:
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** CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=AEWHYWSPVRZHCT-NDZSKPAWSA-J
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* common name:
 
* common name:
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** isobutanoyl-CoA
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** phosphoribosylformylglycinamidine synthase
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* molecular weight:
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* ec number:
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** 833.593   
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** [http://enzyme.expasy.org/EC/6.3.5.3 EC-6.3.5.3]
 
* Synonym(s):
 
* Synonym(s):
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** 2-methylpropanoyl-CoA
 
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** isobutyryl-coenzyme A
 
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** 2-methylpropionyl-CoA
 
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** S-(2-methylpropanoyl)-CoA
 
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** isobutyryl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[1.2.1.25-RXN]]
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** 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[2.3.1.168-RXN]]
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** 1 N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''+''' 1 L-glutamine[c] '''=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 L-glutamate[c] '''+''' 1 ADP[c] '''+''' 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c]
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* [[ISOBUTYRYL-COA-MUTASE-RXN]]
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 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008585001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008585001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 15621-60-0
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266570 45266570]
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* UNIPROT:
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* HMDB : HMDB01243
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** [http://www.uniprot.org/uniprot/O67691 O67691]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9UXW5 Q9UXW5]
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** [http://www.genome.jp/dbget-bin/www_bget?C00630 C00630]
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** [http://www.uniprot.org/uniprot/Q9PNY0 Q9PNY0]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O28339 O28339]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57338 57338]
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** [http://www.uniprot.org/uniprot/Q9PHZ7 Q9PHZ7]
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* METABOLIGHTS : MTBLC57338
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** [http://www.uniprot.org/uniprot/O26270 O26270]
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{{#set: smiles=CC(C(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])C}}
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** [http://www.uniprot.org/uniprot/Q59042 Q59042]
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{{#set: inchi key=InChIKey=AEWHYWSPVRZHCT-NDZSKPAWSA-J}}
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** [http://www.uniprot.org/uniprot/Q58660 Q58660]
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{{#set: common name=isobutanoyl-CoA}}
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** [http://www.uniprot.org/uniprot/O27427 O27427]
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{{#set: molecular weight=833.593    }}
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** [http://www.uniprot.org/uniprot/Q9JWC5 Q9JWC5]
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{{#set: common name=2-methylpropanoyl-CoA|isobutyryl-coenzyme A|2-methylpropionyl-CoA|S-(2-methylpropanoyl)-CoA|isobutyryl-CoA}}
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** [http://www.uniprot.org/uniprot/P35852 P35852]
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{{#set: produced by=1.2.1.25-RXN}}
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** [http://www.uniprot.org/uniprot/P38972 P38972]
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{{#set: consumed or produced by=2.3.1.168-RXN|ISOBUTYRYL-COA-MUTASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q55843 Q55843]
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** [http://www.uniprot.org/uniprot/Q55037 Q55037]
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** [http://www.uniprot.org/uniprot/P12041 P12041]
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** [http://www.uniprot.org/uniprot/P12042 P12042]
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** [http://www.uniprot.org/uniprot/P15254 P15254]
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** [http://www.uniprot.org/uniprot/O14228 O14228]
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** [http://www.uniprot.org/uniprot/P35421 P35421]
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** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07]
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** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04463 R04463]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoribosylformylglycinamidine synthase}}
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{{#set: ec number=EC-6.3.5.3}}
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{{#set: gene associated=CHC_T00008585001|CHC_T00008585001_1}}
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{{#set: in pathway=PWY-6122|PWY-6277|PWY-6121}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:21, 9 January 2019

Reaction FGAMSYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosylformylglycinamidine synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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