Difference between revisions of "RXN-17116"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** guanylate kinase...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17116 RXN-17116] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANYL-KIN-RXN GUANYL-KIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17116 RXN-17116] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** guanylate kinase 1
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.8 EC-2.7.4.8]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[GMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[GDP]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[CPD-18494]][c] '''=>''' 1 [[CPD-17365]][c] '''+''' 1 [[ACETYL-COA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 GMP[c] '''=>''' 1 ADP[c] '''+''' 1 GDP[c]
+
** 1 coenzyme A[c] '''+''' 1 3-oxo-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] '''=>''' 1 (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA[c] '''+''' 1 acetyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009386001]]
+
* Gene: [[CHC_T00009422001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[CHC_T00009349001_1]]
−
* [[CHC_T00009386001_1]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00007666001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
** [[pantograph]]-[[a.taliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
+
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20780 20780]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00332 R00332]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9PNB8 Q9PNB8]
 
−
** [http://www.uniprot.org/uniprot/Q9CEE3 Q9CEE3]
 
−
** [http://www.uniprot.org/uniprot/Q9JT96 Q9JT96]
 
−
** [http://www.uniprot.org/uniprot/P44310 P44310]
 
−
** [http://www.uniprot.org/uniprot/P15454 P15454]
 
−
** [http://www.uniprot.org/uniprot/P60546 P60546]
 
−
** [http://www.uniprot.org/uniprot/P31006 P31006]
 
−
** [http://www.uniprot.org/uniprot/P46195 P46195]
 
−
** [http://www.uniprot.org/uniprot/Q16774 Q16774]
 
−
** [http://www.uniprot.org/uniprot/P72648 P72648]
 
−
** [http://www.uniprot.org/uniprot/Q6RHR9 Q6RHR9]
 
−
** [http://www.uniprot.org/uniprot/Q9M681 Q9M681]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=guanylate kinase 1}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: ec number=EC-2.7.4.8}}
+
{{#set: gene associated=CHC_T00009422001_1|CHC_T00009349001_1}}
−
{{#set: gene associated=CHC_T00009386001|CHC_T00009386001_1|CHC_T00007666001_1}}
+
{{#set: in pathway=PWY-7726}}
−
{{#set: in pathway=PWY-7221}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:02, 23 May 2018

Reaction RXN-17116

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 3-oxo-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c] => 1 (4Z,7Z,10Z,13Z,16Z)-docosapentaenoyl-CoA[c] + 1 acetyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 4 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-17116&oldid=13001"