Difference between revisions of "GLUTDEHYD-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=IDP IDP] == * smiles: ** C(OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC=NC=23)...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=IDP IDP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] ==
−
* smiles:
+
* direction:
−
** C(OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC=NC=23)))
+
** REVERSIBLE
−
* inchi key:
+
−
** InChIKey=JPXZQMKKFWMMGK-KQYNXXCUSA-K
+
 
* common name:
 
* common name:
−
** IDP
+
** Glutamate dehydrogenase
−
* molecular weight:
+
* ec number:
−
** 425.165   
+
** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
 
* Synonym(s):
 
* Synonym(s):
−
** riboxin
 
−
** inosine diphosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-14003]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
−
* [[RXN0-5073]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 H2O[c] '''+''' 1 NADP+[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c]
−
* [[RXN-14120]]
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00010235001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00010235001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
== Pathways  ==
 +
* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 86-04-4
+
* RHEA:
−
* METABOLIGHTS : MTBLC58280
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
−
* PUBCHEM:
+
* UNIPROT:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7156952 7156952]
+
** [http://www.uniprot.org/uniprot/P07262 P07262]
−
* HMDB : HMDB03335
+
** [http://www.uniprot.org/uniprot/P15111 P15111]
−
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/P28724 P28724]
−
** [http://www.genome.jp/dbget-bin/www_bget?C00104 C00104]
+
** [http://www.uniprot.org/uniprot/P43793 P43793]
−
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
−
** [http://www.chemspider.com/Chemical-Structure.3279691.html 3279691]
+
** [http://www.uniprot.org/uniprot/P00370 P00370]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/P00369 P00369]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58280 58280]
+
** [http://www.uniprot.org/uniprot/P29507 P29507]
−
* BIGG : idp
+
** [http://www.uniprot.org/uniprot/P28998 P28998]
−
{{#set: smiles=C(OP(=O)([O-])OP([O-])(=O)[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC=NC=23)))}}
+
** [http://www.uniprot.org/uniprot/P29051 P29051]
−
{{#set: inchi key=InChIKey=JPXZQMKKFWMMGK-KQYNXXCUSA-K}}
+
** [http://www.uniprot.org/uniprot/P31026 P31026]
−
{{#set: common name=IDP}}
+
** [http://www.uniprot.org/uniprot/P39475 P39475]
−
{{#set: molecular weight=425.165    }}
+
** [http://www.uniprot.org/uniprot/P39708 P39708]
−
{{#set: common name=riboxin|inosine diphosphate}}
+
** [http://www.uniprot.org/uniprot/P54387 P54387]
−
{{#set: consumed by=RXN-14003}}
+
** [http://www.uniprot.org/uniprot/P54386 P54386]
−
{{#set: produced by=RXN0-5073}}
+
** [http://www.uniprot.org/uniprot/P95544 P95544]
−
{{#set: consumed or produced by=RXN-14120}}
+
** [http://www.uniprot.org/uniprot/P78804 P78804]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Glutamate dehydrogenase}}
 +
{{#set: ec number=EC-1.4.1.4}}
 +
{{#set: gene associated=CHC_T00010235001|CHC_T00010235001_1}}
 +
{{#set: in pathway=GLUTSYNIII-PWY|PWY-5675|PWY490-3|PWY-5913}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:40, 9 January 2019

Reaction GLUTDEHYD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamate dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 NADP+[c] + 1 L-glutamate[c] <=> 1 2-oxoglutarate[c] + 1 ammonium[c] + 1 H+[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • GLUTSYNIII-PWY, L-glutamate biosynthesis III: GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5675, nitrate reduction V (assimilatory): PWY-5675
    • 3 reactions found over 4 reactions in the full pathway
  • PWY490-3, nitrate reduction VI (assimilatory): PWY490-3
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GLUTDEHYD-RXN&oldid=22105"