Difference between revisions of "RXN0-5114"

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(Created page with "Category:Gene == Gene CHC_T00008944001 == * left end position: ** 259008 * transcription direction: ** POSITIVE * right end position: ** 260300 * centisome position: ** 84...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008944001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] ==
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* left end position:
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* direction:
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** 259008
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3]
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* right end position:
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** 260300
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* centisome position:
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** 84.09378   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PROTEIN-KINASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[WATER]][c] '''+''' 1 [[3-P-SERINE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SER]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 3-phospho-L-serine[c] '''=>''' 1 phosphate[c] '''+''' 1 L-serine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00007222001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00005163001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00006166001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways ==
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* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=259008}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
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{{#set: right end position=260300}}
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* LIGAND-RXN:
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{{#set: centisome position=84.09378    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.1.3.3}}
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{{#set: gene associated=CHC_T00007222001_1|CHC_T00005163001_1|CHC_T00006166001_1}}
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{{#set: in pathway=SERSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 17:42, 9 January 2019

Reaction RXN0-5114

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 3-phospho-L-serine[c] => 1 phosphate[c] + 1 L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-5114&oldid=22150"