Difference between revisions of "CHC T00008810001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1438 RXN1G-1438] == * direction: ** LEFT-TO-RIGHT * common name: ** Trehalose 6-phosphate syn...")
(Created page with "Category:Gene == Gene CHC_T00008810001 == * left end position: ** 559546 * transcription direction: ** POSITIVE * right end position: ** 560275 * centisome position: ** 98...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-1438 RXN1G-1438] ==
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== Gene CHC_T00008810001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 559546
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* common name:
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* transcription direction:
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** Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.1.3.12 EC-3.1.3.12]
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** 560275
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* centisome position:
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** 98.911446   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD1G-773]][c] '''=>''' 1 [[CPD1G-1353]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 H2O[c] '''+''' 1 6-O-cis-keto-mycolyl-trehalose 6-phosphate[c] '''=>''' 1 trehalose-cis-keto-mono-mycolate[c] '''+''' 1 phosphate[c]
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* Reaction: [[GST-RXN]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-13673]]
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* [[CHC_T00009495001]]
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** Source: [[annotation-original_genome]]
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** ORIGINAL_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-15680]]
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* [[CHC_T00008273001]]
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** Source: [[annotation-original_genome]]
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** ORIGINAL_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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* [[CHC_T00010201001]]
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* [[PWY-7112]]
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** ORIGINAL_GENOME
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* [[PWY-6842]]
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***AUTOMATED-NAME-MATCH
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* [[PWY-4061]]
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== Pathways ==
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* [[PWY-7533]]
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* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
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** '''29''' reactions found over '''182''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=559546}}
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{{#set: common name=Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-3.1.3.12}}
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{{#set: right end position=560275}}
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{{#set: gene associated=CHC_T00009495001|CHC_T00008273001|CHC_T00010201001}}
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{{#set: centisome position=98.911446    }}
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{{#set: in pathway=PWYG-321}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:04, 23 May 2018

Gene CHC_T00008810001

  • left end position:
    • 559546
  • transcription direction:
    • POSITIVE
  • right end position:
    • 560275
  • centisome position:
    • 98.911446
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008810001&oldid=16071"