Difference between revisions of "CHC 640"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] == * direction: ** LEFT-TO-RIGHT * e...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HEME-OXYGENASE-DECYCLIZING-RXN HEME-OXYGENASE-DECYCLIZING-RXN] ==
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== Gene CHC_640 ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** accB
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.14.14.18 EC-1.14.14.18]
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** 90601
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 91077
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* centisome position:
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** 50.309856   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
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** 3 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 3 [[WATER]][c] '''+''' 3 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 1 [[FE+2]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 3 a reduced [NADPH-hemoprotein reductase][c] '''+''' 2 H+[c] '''+''' 1 ferroheme b[c] '''+''' 3 oxygen[c] '''=>''' 1 biliverdin-IX-α[c] '''+''' 3 H2O[c] '''+''' 3 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 carbon monoxide[c] '''+''' 1 Fe2+[c]
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== Pathways associated ==
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* [[PWY-5789]]
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== Genes associated with this reaction  ==
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* [[PWY-5744]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-4381]]
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* [[CHC_T00006260001_1]]
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* [[PWY-6679]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-6722]]
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== Pathways  ==
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* [[PWY-7388]]
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* [[PWY-5874]], heme degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5874 PWY-5874]
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* [[PWY-5743]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: common name=accB}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00311 R00311]
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{{#set: left end position=90601}}
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* UNIPROT:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/P23711 P23711]
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{{#set: right end position=91077}}
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** [http://www.uniprot.org/uniprot/P14901 P14901]
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{{#set: centisome position=50.309856    }}
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** [http://www.uniprot.org/uniprot/P30519 P30519]
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{{#set: reaction associated=ACETYL-COA-CARBOXYLTRANSFER-RXN}}
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** [http://www.uniprot.org/uniprot/P06762 P06762]
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{{#set: pathway associated=PWY-5789|PWY-5744|PWY-4381|PWY-6679|PWY-6722|PWY-7388|PWY-5743}}
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** [http://www.uniprot.org/uniprot/P09601 P09601]
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** [http://www.uniprot.org/uniprot/Q7M338 Q7M338]
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** [http://www.uniprot.org/uniprot/P14791 P14791]
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** [http://www.uniprot.org/uniprot/P32394 P32394]
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** [http://www.uniprot.org/uniprot/P72849 P72849]
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** [http://www.uniprot.org/uniprot/P74133 P74133]
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** [http://www.uniprot.org/uniprot/Q9RKR1 Q9RKR1]
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** [http://www.uniprot.org/uniprot/O48782 O48782]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.14.14.18}}
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{{#set: gene associated=CHC_T00006260001_1}}
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{{#set: in pathway=PWY-5874}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:42, 9 January 2019

Gene CHC_640

  • common name:
    • accB
  • left end position:
    • 90601
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 91077
  • centisome position:
    • 50.309856
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_640&oldid=22132"