Difference between revisions of "4.3.1.17-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] == * direction: ** LEFT-TO-RIGHT * common name: ** tryptophan synthase alpha c...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.17-RXN 4.3.1.17-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** tryptophan synthase alpha chain
+
** similar to serine dehydratase
−
** Tryptophan synthase subunit beta
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.122 EC-4.2.1.122]
+
** [http://enzyme.expasy.org/EC/4.3.1.17 EC-4.3.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SER]][c] '''+''' 1 [[INDOLE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[TRP]][c]
+
** 1 [[SER]][c] '''=>''' 1 [[PYRUVATE]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-serine[c] '''+''' 1 indole[c] '''=>''' 1 H2O[c] '''+''' 1 L-tryptophan[c]
+
** 1 L-serine[c] '''=>''' 1 pyruvate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009102001_1]]
+
* Gene: [[CHC_T00009480001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_1120]]
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*** Assignment: AUTOMATED-NAME-MATCH
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008401001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-original_genome]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26434 26434]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19169 19169]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q7M194 Q7M194]
 +
** [http://www.uniprot.org/uniprot/P30744 P30744]
 +
** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54]
 +
** [http://www.uniprot.org/uniprot/P56072 P56072]
 +
** [http://www.uniprot.org/uniprot/P25379 P25379]
 +
** [http://www.uniprot.org/uniprot/P16095 P16095]
 +
** [http://www.uniprot.org/uniprot/P20132 P20132]
 +
** [http://www.uniprot.org/uniprot/P09367 P09367]
 +
** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51]
 +
** [http://www.uniprot.org/uniprot/P17324 P17324]
 +
** [http://www.uniprot.org/uniprot/P80212 P80212]
 +
** [http://www.uniprot.org/uniprot/P80213 P80213]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=tryptophan synthase alpha chain}}
+
{{#set: common name=similar to serine dehydratase}}
−
{{#set: common name=Tryptophan synthase subunit beta}}
+
{{#set: ec number=EC-4.3.1.17}}
−
{{#set: ec number=EC-4.2.1.122}}
+
{{#set: gene associated=CHC_T00009480001}}
−
{{#set: gene associated=CHC_T00009102001_1|CHC_1120|CHC_T00008401001}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=TRPSYN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-original_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:51, 9 January 2019

Reaction 4.3.1.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • similar to serine dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-serine[c] => 1 pyruvate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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