Difference between revisions of "OHACYL-COA-DEHYDROG-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5337 PWY-5337] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5337 PWY-5337] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=OHACYL-COA-DEHYDROG-RXN OHACYL-COA-DEHYDROG-RXN] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
+
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** stachyose biosynthesis
+
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
 
* Synonym(s):
 
* Synonym(s):
−
** raffinose biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
* '''2''' reaction(s) found
+
* With identifiers:
−
** [[2.4.1.67-RXN]]
+
** 1 [[NAD]][c] '''+''' 1 [[L-3-HYDROXYACYL-COA]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[3-KETOACYL-COA]][c]
−
** [[2.4.1.82-RXN]]
+
* With common name(s):
−
== Reaction(s) not found ==
+
** 1 NAD+[c] '''+''' 1 a (3S)-3-hydroxyacyl-CoA[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a 3-oxoacyl-CoA[c]
−
* '''1''' reaction(s) not found
+
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN]
+
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00009422001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008557001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00009349001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
== Pathways  ==
 +
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
+
* RHEA:
−
** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5337 PWY-5337]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22432 22432]
−
{{#set: taxonomic range=TAX-3398}}
+
* UNIPROT:
−
{{#set: common name=stachyose biosynthesis}}
+
** [http://www.uniprot.org/uniprot/P21177 P21177]
−
{{#set: common name=raffinose biosynthesis}}
+
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
−
{{#set: reaction found=2}}
+
** [http://www.uniprot.org/uniprot/Q53924 Q53924]
−
{{#set: reaction not found=1}}
+
** [http://www.uniprot.org/uniprot/P07896 P07896]
 +
** [http://www.uniprot.org/uniprot/Q61425 Q61425]
 +
** [http://www.uniprot.org/uniprot/Q16836 Q16836]
 +
** [http://www.uniprot.org/uniprot/P28793 P28793]
 +
** [http://www.uniprot.org/uniprot/P22414 P22414]
 +
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
 +
** [http://www.uniprot.org/uniprot/P34439 P34439]
 +
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
 +
** [http://www.uniprot.org/uniprot/P55100 P55100]
 +
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 +
** [http://www.uniprot.org/uniprot/P00348 P00348]
 +
* PIR:
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A39592 A39592]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A49613 A49613]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A55045 A55045]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DEPGC DEPGC]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=DWRTEP DWRTEP]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4210 JC4210]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4879 JC4879]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JX0199 JX0199]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S32607 S32607]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36678 S36678]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40743 S40743]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S54786 S54786]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57651 S57651]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S74114 S74114]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T10464 T10464]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T46866 T46866]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01778 R01778]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.1.1.35}}
 +
{{#set: gene associated=CHC_T00009422001_1|CHC_T00008557001_1|CHC_T00009349001_1}}
 +
{{#set: in pathway=PWY-5136|PWY-7007|FAO-PWY|PWY66-391}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:23, 9 January 2019

Reaction OHACYL-COA-DEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
    • 3 reactions found over 6 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=OHACYL-COA-DEHYDROG-RXN&oldid=20240"