Difference between revisions of "RXN-12203"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** biotin synthetase * ec...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12203 RXN-12203] == * direction: ** LEFT-TO-RIGHT * common name: ** Alpha-glucan water dikinase...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.8.1.6-RXN 2.8.1.6-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12203 RXN-12203] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** biotin synthetase
+
** Alpha-glucan water dikinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.8.1.6 EC-2.8.1.6]
+
** [http://enzyme.expasy.org/EC/2.7.9.4 EC-2.7.9.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[DETHIOBIOTIN]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[CH33ADO]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[BIOTIN]][c] '''+''' 2 [[MET]][c]
+
** n [[WATER]][c] '''+''' n [[ATP]][c] '''+''' 1 [[Starch]][c] '''=>''' 1 [[6-Phosphogluco-Amylopectins]][c] '''+''' n [[AMP]][c] '''+''' n [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 1 dethiobiotin[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''+''' 2 S-adenosyl-L-methionine[c] '''=>''' 2 5'-deoxyadenosine[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 1 biotin[c] '''+''' 2 L-methionine[c]
+
** n H2O[c] '''+''' n ATP[c] '''+''' 1 starch[c] '''=>''' 1 a 6-phosphogluco-amylopectin[c] '''+''' n AMP[c] '''+''' n phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009361001]]
+
* Gene: [[CHC_T00008789001]]
−
** ORIGINAL_GENOME
+
** Source: [[annotation-original_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[CHC_T00009361001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
+
* [[PWY-6724]], starch degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6724 PWY-6724]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-original_genome]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pathwaytools]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22060 22060]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01078 R01078]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JRW7 Q9JRW7]
 
−
** [http://www.uniprot.org/uniprot/Q9PLZ3 Q9PLZ3]
 
−
** [http://www.uniprot.org/uniprot/P53557 P53557]
 
−
** [http://www.uniprot.org/uniprot/O67104 O67104]
 
−
** [http://www.uniprot.org/uniprot/P44987 P44987]
 
−
** [http://www.uniprot.org/uniprot/Q58692 Q58692]
 
−
** [http://www.uniprot.org/uniprot/P0A506 P0A506]
 
−
** [http://www.uniprot.org/uniprot/Q9Z6L5 Q9Z6L5]
 
−
** [http://www.uniprot.org/uniprot/Q9JUE3 Q9JUE3]
 
−
** [http://www.uniprot.org/uniprot/P46396 P46396]
 
−
** [http://www.uniprot.org/uniprot/Q47862 Q47862]
 
−
** [http://www.uniprot.org/uniprot/P19206 P19206]
 
−
** [http://www.uniprot.org/uniprot/P32451 P32451]
 
−
** [http://www.uniprot.org/uniprot/P54967 P54967]
 
−
** [http://www.uniprot.org/uniprot/P46715 P46715]
 
−
** [http://www.uniprot.org/uniprot/P73538 P73538]
 
−
** [http://www.uniprot.org/uniprot/P12996 P12996]
 
−
** [http://www.uniprot.org/uniprot/O59778 O59778]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=biotin synthetase}}
+
{{#set: common name=Alpha-glucan water dikinase}}
−
{{#set: ec number=EC-2.8.1.6}}
+
{{#set: ec number=EC-2.7.9.4}}
−
{{#set: gene associated=CHC_T00009361001|CHC_T00009361001_1}}
+
{{#set: gene associated=CHC_T00008789001}}
−
{{#set: in pathway=PWY0-1507|PWY-7380}}
+
{{#set: in pathway=PWY-6724}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-original_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:09, 23 May 2018

Reaction RXN-12203

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Alpha-glucan water dikinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • n H2O[c] + n ATP[c] + 1 starch[c] => 1 a 6-phosphogluco-amylopectin[c] + n AMP[c] + n phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6724, starch degradation II: PWY-6724
    • 6 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12203&oldid=16346"