Difference between revisions of "PWY66-4"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-DEHYDROGENASE-NADP+-RXN GLUTAMATE-DEHYDROGENASE-NADP+-RXN] == * direction: ** REVERSIBLE...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-DEHYDROGENASE-NADP+-RXN GLUTAMATE-DEHYDROGENASE-NADP+-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4] ==
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* direction:
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** REVERSIBLE
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* common name:
 
* common name:
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** Glutamate dehydrogenase
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** cholesterol biosynthesis III (via desmosterol)
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/1.4.1.3 EC-1.4.1.3]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''16''' reactions found over '''22''' reactions in the full pathway
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** 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
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* [[PWY-5670]]
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* With common name(s):
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** 0 associated gene:
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** 1 NAD(P)+[c] '''+''' 1 L-glutamate[c] '''+''' 1 H2O[c] '''<=>''' 1 H+[c] '''+''' 1 ammonium[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 NAD(P)H[c]
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* [[RXN-11887]]
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** 1 associated gene(s):
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== Genes associated with this reaction  ==
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*** [[CHC_T00006481001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[CHC_T00010235001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00010235001]]
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* [[RXN66-27]]
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** ORIGINAL_GENOME
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** 1 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[CHC_T00006493001_1]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
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*** [[orthology-ectocarpus_siliculosus]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[RXN66-28]]
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* [[GLUTAMATE-SYN2-PWY]], L-glutamate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMATE-SYN2-PWY GLUTAMATE-SYN2-PWY]
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** 1 associated gene(s):
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** '''1''' reactions found over '''1''' reactions in the full pathway
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*** [[CHC_T00002789001_1]]
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* [[PWY-5766]], L-glutamate degradation X: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5766 PWY-5766]
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** 1 reconstruction source(s) associated:
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** '''1''' reactions found over '''1''' reactions in the full pathway
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*** [[orthology-arabidopsis_thaliana]]
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* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY]
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* [[RXN66-303]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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** 1 associated gene(s):
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== Reconstruction information  ==
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*** [[CHC_T00009303001_1]]
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* [[orthology]]:
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** 2 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[annotation]]:
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* [[RXN66-304]]
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** [[pathwaytools]]:
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** 1 associated gene(s):
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*** [[original_genome]]
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*** [[CHC_T00009303001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN66-305]]
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** 1 associated gene(s):
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*** [[CHC_T00009303001_1]]
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** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN66-306]]
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** 1 associated gene(s):
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*** [[CHC_T00003466001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN66-310]]
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** 1 associated gene(s):
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*** [[CHC_T00010320001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN66-311]]
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** 1 associated gene(s):
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*** [[CHC_T00010320001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN66-312]]
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** 1 associated gene(s):
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*** [[CHC_T00010320001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN66-313]]
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** 1 associated gene(s):
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*** [[CHC_T00003646001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN66-315]]
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** 1 associated gene(s):
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*** [[CHC_T00010320001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN66-316]]
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** 1 associated gene(s):
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*** [[CHC_T00010320001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN66-317]]
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** 1 associated gene(s):
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*** [[CHC_T00010320001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN66-318]]
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** 1 associated gene(s):
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*** [[CHC_T00003646001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6132 PWY-6132]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6132 PWY-6132]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-314 RXN66-314]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-319 RXN66-319]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN66-320 RXN66-320]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: common name=cholesterol biosynthesis III (via desmosterol)}}
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** [http://www.uniprot.org/uniprot/P49448 P49448]
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.uniprot.org/uniprot/P00366 P00366]
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{{#set: reaction found=16}}
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** [http://www.uniprot.org/uniprot/P00368 P00368]
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{{#set: total reaction=22}}
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** [http://www.uniprot.org/uniprot/P00367 P00367]
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{{#set: completion rate=73.0}}
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** [http://www.uniprot.org/uniprot/Q7LZR0 Q7LZR0]
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** [http://www.uniprot.org/uniprot/P10860 P10860]
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** [http://www.uniprot.org/uniprot/P26443 P26443]
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** [http://www.uniprot.org/uniprot/P80053 P80053]
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** [http://www.uniprot.org/uniprot/Q9UWM2 Q9UWM2]
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** [http://www.uniprot.org/uniprot/P42174 P42174]
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** [http://www.uniprot.org/uniprot/P52596 P52596]
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** [http://www.uniprot.org/uniprot/P96110 P96110]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glutamate dehydrogenase}}
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{{#set: ec number=EC-1.4.1.3}}
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{{#set: gene associated=CHC_T00010235001_1|CHC_T00010235001}}
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{{#set: in pathway=GLUDEG-I-PWY|GLUTAMATE-SYN2-PWY|PWY-5766|ARGININE-SYN4-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=original_genome}}
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Latest revision as of 17:50, 9 January 2019

Pathway PWY66-4

  • common name:
    • cholesterol biosynthesis III (via desmosterol)
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

16 reactions found over 22 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY66-4&oldid=22351"