Difference between revisions of "3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] == * direction: ** REVERSIBLE * common name: ** Rab geranylgeranyltransferase, b...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** Rab geranylgeranyltransferase, beta subunit
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.60 EC-2.5.1.60]
+
** [http://enzyme.expasy.org/EC/2.1.2.11 EC-2.1.2.11]
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** [http://enzyme.expasy.org/EC/2.5.1.59 EC-2.5.1.59]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROT-CYS]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[S-GERANYLGERANYL-PROTEIN]][c]
+
** 1 [[METHYLENE-THF-GLU-N]][c] '''+''' 1 [[2-KETO-ISOVALERATE]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[2-DEHYDROPANTOATE]][c] '''+''' 1 [[THF-GLU-N]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [protein]-L-cysteine[c] '''+''' 1 geranylgeranyl diphosphate[c] '''<=>''' 1 diphosphate[c] '''+''' 1 a [protein]-S-geranylgeranyl-L-cysteine[c]
+
** 1 a 5,10-methylene-tetrahydrofolate[c] '''+''' 1 3-methyl-2-oxobutanoate[c] '''+''' 1 H2O[c] '''<=>''' 1 2-dehydropantoate[c] '''+''' 1 a tetrahydrofolate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00003446001_1]]
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* Gene: [[CHC_T00001868001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00006421001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009072001]]
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−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
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−
* [[CHC_T00009072001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PANTO-PWY]], phosphopantothenate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PANTO-PWY PANTO-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11824 11824]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9V0E1 Q9V0E1]
 +
** [http://www.uniprot.org/uniprot/Q9JUY0 Q9JUY0]
 +
** [http://www.uniprot.org/uniprot/P31057 P31057]
 +
** [http://www.uniprot.org/uniprot/Q9PIK1 Q9PIK1]
 +
** [http://www.uniprot.org/uniprot/P38122 P38122]
 +
** [http://www.uniprot.org/uniprot/Q09672 Q09672]
 +
** [http://www.uniprot.org/uniprot/P52997 P52997]
 +
** [http://www.uniprot.org/uniprot/Q9X712 Q9X712]
 +
** [http://www.uniprot.org/uniprot/Q9Y7B6 Q9Y7B6]
 +
** [http://www.uniprot.org/uniprot/Q9L7B2 Q9L7B2]
 +
** [http://www.uniprot.org/uniprot/Q9RKS2 Q9RKS2]
 +
** [http://www.uniprot.org/uniprot/Q9RLE2 Q9RLE2]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01226 R01226]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=Rab geranylgeranyltransferase, beta subunit}}
+
{{#set: ec number=EC-2.1.2.11}}
−
{{#set: ec number=EC-2.5.1.60}}
+
{{#set: gene associated=CHC_T00001868001_1}}
−
{{#set: ec number=EC-2.5.1.59}}
+
{{#set: in pathway=PANTO-PWY}}
−
{{#set: gene associated=CHC_T00003446001_1|CHC_T00006421001_1|CHC_T00009072001|CHC_T00009072001_1}}
+
−
{{#set: in pathway=}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:24, 9 January 2019

Reaction 3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PANTO-PWY, phosphopantothenate biosynthesis I: PANTO-PWY
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




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