Difference between revisions of "RXN-5463"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/4.2.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6383 RXN-6383] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5463 RXN-5463] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.2.1.116 EC-4.2.1.116]
+
** [http://enzyme.expasy.org/EC/2.4.1.257 EC-2.4.1.257]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''<=>''' 1 [[ACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
+
** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[CPD-5161]][c] '''=>''' 1 [[CPD-5162]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 3-hydroxypropanoyl-CoA[c] '''<=>''' 1 acryloyl-CoA[c] '''+''' 1 H2O[c]
+
** 1 GDP-&alpha;-D-mannose[c] '''+''' 1 &alpha;-D-Man-(1&rarr;3)-&beta;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 &alpha;-D-Man-(1&rarr;3)-[&alpha;-D-Man-(1&rarr;6)]-&alpha;-D-Man-(1&rarr;4)-&beta;-D-GlcNAc-(1&rarr;4)-&alpha;-D-GlcNAc-diphosphodolichol[c] '''+''' 1 H+[c] '''+''' 1 GDP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009110001_1]]
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* Gene: [[CHC_T00007099001_1]]
−
** [[pantograph]]-[[a.taliana]]
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** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00008882001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009349001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''15''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-3941]], &beta;-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-5743]], 3-hydroxypropanoate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5743 PWY-5743]
+
−
** '''2''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5789 PWY-5789]
+
−
** '''5''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-5744]], glyoxylate assimilation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5744 PWY-5744]
+
−
** '''2''' reactions found over '''11''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[a.taliana]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26518 26518]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29522 29522]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03045 R03045]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06238 R06238]
−
{{#set: direction=REVERSIBLE}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.2.1.116}}
+
{{#set: ec number=EC-2.4.1.257}}
−
{{#set: gene associated=CHC_T00009110001_1|CHC_T00008882001_1|CHC_T00009349001_1}}
+
{{#set: gene associated=CHC_T00007099001_1}}
−
{{#set: in pathway=PWY-7574|PWY-3941|PWY-5743|PWY-5789|PWY-5744}}
+
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=a.taliana}}
 

Latest revision as of 16:13, 23 May 2018

Reaction RXN-5463

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] + 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 H+[c] + 1 GDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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