Difference between revisions of "RXN-16165"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=P3I P3I] == * smiles: ** [O-]P(OP(=O)(OP([O-])(=O)[O-])[O-])([O-])=O * inchi key: ** InChIKey=U...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=P3I P3I] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16165 RXN-16165] ==
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* smiles:
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* direction:
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** [O-]P(OP(=O)(OP([O-])(=O)[O-])[O-])([O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=UNXRWKVEANCORM-UHFFFAOYSA-I
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* common name:
 
* common name:
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** PPPi
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** methionine--tRNA ligase, cytoplasmic
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* molecular weight:
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* ec number:
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** 252.915   
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** [http://enzyme.expasy.org/EC/6.1.1.10 EC-6.1.1.10]
 
* Synonym(s):
 
* Synonym(s):
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** inorganic triphosphate
 
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** tripolyphosphate
 
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** triphosphate
 
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** inorganic open chain tripolyphosphate
 
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** P3,i
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[BTUR2-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[Initiation-tRNAmet]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[L-methionyl-tRNAfmet]][c] '''+''' 1 [[AMP]][c]
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* [[R344-RXN]]
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* With common name(s):
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* [[RXN0-5507]]
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** 1 ATP[c] '''+''' 1 L-methionine[c] '''+''' 1 initiator tRNAmet[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-methionyl-[initiator tRNAmet][c] '''+''' 1 AMP[c]
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* [[COBALADENOSYLTRANS-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00006241001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00007020001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009091001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009091001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 14127-68-5
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{{#set: direction=LEFT-TO-RIGHT}}
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* METABOLIGHTS : MTBLC18036
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{{#set: common name=methionine--tRNA ligase, cytoplasmic}}
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* PUBCHEM:
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{{#set: ec number=EC-6.1.1.10}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3440921 3440921]
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{{#set: gene associated=CHC_T00006241001_1|CHC_T00007020001_1|CHC_T00009091001_1|CHC_T00009091001}}
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* HMDB : HMDB03379
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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* LIGAND-CPD:
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{{#set: reconstruction category=orthology|annotation}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00536 C00536]
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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* CHEMSPIDER:
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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** [http://www.chemspider.com/Chemical-Structure.2683694.html 2683694]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18036 18036]
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* BIGG : pppi
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{{#set: smiles=[O-]P(OP(=O)(OP([O-])(=O)[O-])[O-])([O-])=O}}
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{{#set: inchi key=InChIKey=UNXRWKVEANCORM-UHFFFAOYSA-I}}
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{{#set: common name=PPPi}}
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{{#set: molecular weight=252.915    }}
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{{#set: common name=inorganic triphosphate|tripolyphosphate|triphosphate|inorganic open chain tripolyphosphate|P3,i}}
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{{#set: produced by=BTUR2-RXN|R344-RXN|RXN0-5507|COBALADENOSYLTRANS-RXN}}
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Latest revision as of 17:01, 9 January 2019

Reaction RXN-16165

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • methionine--tRNA ligase, cytoplasmic
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-methionine[c] + 1 initiator tRNAmet[c] => 1 diphosphate[c] + 1 an L-methionyl-[initiator tRNAmet][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-16165&oldid=22585"