Difference between revisions of "RXN-9644"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Carboxylates Carboxylates] == * common name: ** a carboxylate * Synonym(s): ** carboxylic acid...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Carboxylates Carboxylates] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9644 RXN-9644] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a carboxylate
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** long-chain-fatty-acid-CoA ligase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** carboxylic acid
 
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** carboxylate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[CARBOXYLESTERASE-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[OLEATE-CPD]][c] '''=>''' 1 [[OLEOYL-COA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* [[LYSOPHOSPHOLIPASE-RXN]]
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* With common name(s):
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* [[ACYLPHOSPHATASE-RXN]]
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 oleate[c] '''=>''' 1 oleoyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* [[ALDHDEHYDROG-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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* [[3.5.5.1-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[AMINOACYLASE-RXN]]
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* Gene: [[CHC_T00008811001_1]]
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* [[ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008811001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008160001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009428001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009428001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008500001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-6001]], linoleate biosynthesis II (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6001 PWY-6001]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5147]], oleate biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5147 PWY-5147]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a carboxylate}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=carboxylic acid|carboxylate}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: produced by=CARBOXYLESTERASE-RXN|LYSOPHOSPHOLIPASE-RXN|ACYLPHOSPHATASE-RXN|ALDHDEHYDROG-RXN}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: consumed or produced by=3.5.5.1-RXN|AMINOACYLASE-RXN|ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN}}
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{{#set: gene associated=CHC_T00008811001_1|CHC_T00008811001|CHC_T00008160001_1|CHC_T00009428001|CHC_T00009428001_1|CHC_T00008500001_1}}
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{{#set: in pathway=PWY-6001|PWY-5147}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:05, 9 January 2019

Reaction RXN-9644

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 coenzyme A[c] + 1 oleate[c] => 1 oleoyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6001, linoleate biosynthesis II (animals): PWY-6001
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5147, oleate biosynthesis I (plants): PWY-5147
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-9644&oldid=22680"