Difference between revisions of "UDPNACETYLMURAMATEDEHYDROG-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15666 CPD-15666] == * smiles: ** CCCCCCC=CCCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15666 CPD-15666] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] ==
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* smiles:
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* direction:
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** CCCCCCC=CCCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=OOSDLBAXVXKFIB-GTUBXKNVSA-J
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** [http://enzyme.expasy.org/EC/1.3.1.98 EC-1.3.1.98]
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* common name:
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** 6-cis, 2-trans-tridecadienoyl-CoA
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* molecular weight:
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** 955.803   
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* Synonym(s):
 
* Synonym(s):
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** 6Z, 2E-tridecadienoyl-CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-14771]]
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** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''=>''' 1 [[UDP-N-ACETYLMURAMATE]][c] '''+''' 1 [[NADP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] '''=>''' 1 UDP-N-acetyl-α-D-muramate[c] '''+''' 1 NADP+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00000692001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00007033001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658546 90658546]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12248 12248]
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{{#set: smiles=CCCCCCC=CCCC=CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=OOSDLBAXVXKFIB-GTUBXKNVSA-J}}
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** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01]
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{{#set: common name=6-cis, 2-trans-tridecadienoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28]
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{{#set: molecular weight=955.803    }}
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** [http://www.uniprot.org/uniprot/P44605 P44605]
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{{#set: common name=6Z, 2E-tridecadienoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P08373 P08373]
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{{#set: produced by=RXN-14771}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.3.1.98}}
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{{#set: gene associated=CHC_T00000692001_1|CHC_T00007033001_1}}
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{{#set: in pathway=PWY-6387|PWY-6386}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 18:05, 9 January 2019

Reaction UDPNACETYLMURAMATEDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6387, UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): PWY-6387
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6386, UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): PWY-6386
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




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