Difference between revisions of "RXN-15556"
From metabolic_network
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15556 RXN-15556] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
+ | * common name: | ||
+ | ** ubiquitin-conjugating enzyme E2 | ||
+ | ** Ubiquitin-conjugating enzyme, E2 | ||
+ | ** ubiquitin conjugating enzyme E2 | ||
+ | * ec number: | ||
+ | ** [http://enzyme.expasy.org/EC/2.3.2.23 EC-2.3.2.23] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[S- | + | ** 1 [[S-ubiquitinyl-UAP-E1-L-cysteine]][c] '''+''' 1 [[Ubiquitin-carrier-protein-E2-L-cysteine]][c] '''=>''' 1 [[Ubiquitin-activating-protein-E1-L-cys]][c] '''+''' 1 [[S-ubiquitinyl-UCP-E2-L-cysteine]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 S- | + | ** 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c] '''+''' 1 an [E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''=>''' 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c] '''+''' 1 an S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[ | + | * Gene: [[CHC_T00009358001]] |
− | ** [[ | + | ** Source: [[annotation-original_genome]] |
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00010007001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00006427001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00002417001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00010352001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00004841001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00000387001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00008502001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00002999001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00000123001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00005531001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00004399001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00002451001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00004299001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00009466001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00002169001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00007701001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00009526001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00009159001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00005498001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00002791001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00009358001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00001326001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00009526001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00003230001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00006980001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00003966001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00004619001_1]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00008828001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00003204001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00009466001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00004379001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00010346001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00008443001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00006277001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00010346001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
+ | * Gene: [[CHC_T00006794001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00007651001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | * Gene: [[CHC_T00005234001_1]] | ||
+ | ** Source: [[orthology-galdieria.sulphuraria]] | ||
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | * Gene: [[CHC_T00008443001]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511] | ||
+ | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
− | * [[orthology]]: | + | * Category: [[orthology]] |
− | ** [[pantograph]]: | + | ** Source: [[orthology-galdieria.sulphuraria]] |
− | *** [[ | + | *** Tool: [[pantograph]] |
+ | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
+ | *** Tool: [[pantograph]] | ||
+ | * Category: [[annotation]] | ||
+ | ** Source: [[annotation-original_genome]] | ||
+ | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
− | |||
− | |||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: gene associated= | + | {{#set: common name=ubiquitin-conjugating enzyme E2}} |
− | {{#set: in pathway=}} | + | {{#set: common name=Ubiquitin-conjugating enzyme, E2}} |
− | {{#set: reconstruction category=orthology}} | + | {{#set: common name=ubiquitin conjugating enzyme E2}} |
− | {{#set: reconstruction | + | {{#set: ec number=EC-2.3.2.23}} |
− | {{#set: reconstruction | + | {{#set: gene associated=CHC_T00009358001|CHC_T00010007001_1|CHC_T00006427001_1|CHC_T00002417001_1|CHC_T00010352001_1|CHC_T00004841001_1|CHC_T00000387001_1|CHC_T00008502001_1|CHC_T00002999001_1|CHC_T00000123001_1|CHC_T00005531001_1|CHC_T00004399001_1|CHC_T00002451001_1|CHC_T00004299001_1|CHC_T00009466001|CHC_T00002169001_1|CHC_T00007701001_1|CHC_T00009526001_1|CHC_T00009159001_1|CHC_T00005498001_1|CHC_T00002791001_1|CHC_T00009358001_1|CHC_T00001326001_1|CHC_T00009526001|CHC_T00003230001_1|CHC_T00006980001_1|CHC_T00003966001_1|CHC_T00004619001_1|CHC_T00008828001_1|CHC_T00003204001_1|CHC_T00009466001_1|CHC_T00004379001_1|CHC_T00010346001_1|CHC_T00008443001_1|CHC_T00006277001_1|CHC_T00010346001|CHC_T00006794001_1|CHC_T00007651001_1|CHC_T00005234001_1|CHC_T00008443001}} |
+ | {{#set: in pathway=PWY-7511}} | ||
+ | {{#set: reconstruction category=orthology|annotation}} | ||
+ | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} | ||
+ | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Latest revision as of 17:08, 9 January 2019
Contents
Reaction RXN-15556
- direction:
- LEFT-TO-RIGHT
- common name:
- ubiquitin-conjugating enzyme E2
- Ubiquitin-conjugating enzyme, E2
- ubiquitin conjugating enzyme E2
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 an S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine[c] + 1 an [E2 ubiquitin-conjugating enzyme]-L-cysteine[c] => 1 an [E1 ubiquitin-activating enzyme]-L-cysteine[c] + 1 an S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009358001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00010007001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00006427001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00002417001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00010352001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00004841001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00000387001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00008502001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00002999001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00000123001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00005531001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00004399001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00002451001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00004299001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009466001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00002169001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00007701001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00009526001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009159001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00005498001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00002791001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00009358001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00001326001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009526001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00003230001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00006980001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00003966001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00004619001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008828001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00003204001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00009466001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00004379001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00010346001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008443001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00006277001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00010346001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00006794001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00007651001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00005234001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008443001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome